Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 FEM1AP1-201ENST00000431297 1995 ntBASIC21.15■□□□□ 0.98
CDH9Q9ULB4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH9Q9ULB4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
CDH9Q9ULB4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
CDH9Q9ULB4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDH9Q9ULB4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CDH9Q9ULB4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CDH9Q9ULB4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDH9Q9ULB4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.14■□□□□ 0.98
CDH9Q9ULB4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDH9Q9ULB4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CDH9Q9ULB4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 KRASP1-201ENST00000407852 552 ntBASIC21.14■□□□□ 0.97
CDH9Q9ULB4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH9Q9ULB4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 AC110285.5-201ENST00000611501 352 ntBASIC21.13■□□□□ 0.97
CDH9Q9ULB4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
CDH9Q9ULB4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 GABARAPL3-202ENST00000624044 1851 ntBASIC21.12■□□□□ 0.97
CDH9Q9ULB4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CDH9Q9ULB4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 BX119927.1-201ENST00000636596 1552 ntBASIC21.11■□□□□ 0.97
CDH9Q9ULB4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.11■□□□□ 0.97
CDH9Q9ULB4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH9Q9ULB4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CDH9Q9ULB4 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms