Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 KRT8P8-201ENST00000434750 1448 ntBASIC32.14■■■□□ 2.74
RIMBP3Q9UFD9 FAM220CP-201ENST00000395253 831 ntBASIC32.14■■■□□ 2.74
RIMBP3Q9UFD9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC32.14■■■□□ 2.74
RIMBP3Q9UFD9 AC004951.3-201ENST00000418645 1148 ntBASIC32.14■■■□□ 2.74
RIMBP3Q9UFD9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
RIMBP3Q9UFD9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC32.14■■■□□ 2.74
RIMBP3Q9UFD9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
RIMBP3Q9UFD9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.73
RIMBP3Q9UFD9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.73
RIMBP3Q9UFD9 LINC01124-201ENST00000409786 2117 ntBASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 AP002469.2-201ENST00000531724 424 ntBASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC32.13■■■□□ 2.73
RIMBP3Q9UFD9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC32.12■■■□□ 2.73
RIMBP3Q9UFD9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RIMBP3Q9UFD9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
RIMBP3Q9UFD9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC32.11■■■□□ 2.73
RIMBP3Q9UFD9 HLA-G-203ENST00000376818 1127 ntBASIC32.11■■■□□ 2.73
RIMBP3Q9UFD9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC32.11■■■□□ 2.73
RIMBP3Q9UFD9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC32.11■■■□□ 2.73
RIMBP3Q9UFD9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
RIMBP3Q9UFD9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
RIMBP3Q9UFD9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
RIMBP3Q9UFD9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
RIMBP3Q9UFD9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
RIMBP3Q9UFD9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RIMBP3Q9UFD9 LINC01311-201ENST00000565162 1445 ntBASIC32.1■■■□□ 2.73
RIMBP3Q9UFD9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
RIMBP3Q9UFD9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC32.1■■■□□ 2.73
RIMBP3Q9UFD9 AC026471.6-201ENST00000622954 1905 ntBASIC32.1■■■□□ 2.73
RIMBP3Q9UFD9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RIMBP3Q9UFD9 MIR1233-2-201ENST00000408138 82 ntBASIC32.1■■■□□ 2.73
RIMBP3Q9UFD9 MIR1233-1-201ENST00000408722 82 ntBASIC32.1■■■□□ 2.73
RIMBP3Q9UFD9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC32.1■■■□□ 2.73
RIMBP3Q9UFD9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC32.1■■■□□ 2.73
RIMBP3Q9UFD9 AL023803.3-201ENST00000615559 522 ntBASIC32.1■■■□□ 2.73
RIMBP3Q9UFD9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
RIMBP3Q9UFD9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RIMBP3Q9UFD9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC32.09■■■□□ 2.73
RIMBP3Q9UFD9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
RIMBP3Q9UFD9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC32.09■■■□□ 2.73
RIMBP3Q9UFD9 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC32.09■■■□□ 2.73
RIMBP3Q9UFD9 MRPL3P1-201ENST00000400109 1033 ntBASIC32.09■■■□□ 2.73
RIMBP3Q9UFD9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
RIMBP3Q9UFD9 AL512604.3-201ENST00000569583 964 ntBASIC32.09■■■□□ 2.73
RIMBP3Q9UFD9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
RIMBP3Q9UFD9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC32.09■■■□□ 2.73
RIMBP3Q9UFD9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC32.09■■■□□ 2.73
RIMBP3Q9UFD9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC32.08■■■□□ 2.73
RIMBP3Q9UFD9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
RIMBP3Q9UFD9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC32.08■■■□□ 2.73
RIMBP3Q9UFD9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC32.08■■■□□ 2.73
RIMBP3Q9UFD9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
RIMBP3Q9UFD9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
RIMBP3Q9UFD9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
RIMBP3Q9UFD9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
RIMBP3Q9UFD9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
RIMBP3Q9UFD9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
RIMBP3Q9UFD9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
RIMBP3Q9UFD9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.73
RIMBP3Q9UFD9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
RIMBP3Q9UFD9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC32.07■■■□□ 2.72
RIMBP3Q9UFD9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
RIMBP3Q9UFD9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC32.07■■■□□ 2.72
RIMBP3Q9UFD9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC32.07■■■□□ 2.72
RIMBP3Q9UFD9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
RIMBP3Q9UFD9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC32.07■■■□□ 2.72
RIMBP3Q9UFD9 SPDYE15P-201ENST00000424157 909 ntBASIC32.07■■■□□ 2.72
RIMBP3Q9UFD9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC32.07■■■□□ 2.72
RIMBP3Q9UFD9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC32.06■■■□□ 2.72
RIMBP3Q9UFD9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
RIMBP3Q9UFD9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
RIMBP3Q9UFD9 STARP1-201ENST00000397973 869 ntBASIC32.06■■■□□ 2.72
RIMBP3Q9UFD9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC32.06■■■□□ 2.72
RIMBP3Q9UFD9 AC079776.4-201ENST00000511039 504 ntBASIC32.06■■■□□ 2.72
RIMBP3Q9UFD9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC32.06■■■□□ 2.72
RIMBP3Q9UFD9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC32.06■■■□□ 2.72
RIMBP3Q9UFD9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
RIMBP3Q9UFD9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC32.06■■■□□ 2.72
RIMBP3Q9UFD9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC32.06■■■□□ 2.72
RIMBP3Q9UFD9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
RIMBP3Q9UFD9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC32.05■■■□□ 2.72
RIMBP3Q9UFD9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RIMBP3Q9UFD9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RIMBP3Q9UFD9 YBX1P10-201ENST00000444752 975 ntBASIC32.05■■■□□ 2.72
RIMBP3Q9UFD9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC32.05■■■□□ 2.72
RIMBP3Q9UFD9 AL355385.1-201ENST00000606123 409 ntBASIC32.05■■■□□ 2.72
RIMBP3Q9UFD9 AC011298.2-201ENST00000617989 482 ntBASIC32.05■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms