Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.68■□□□□ 0.58
CNIH4Q9P003 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNIH4Q9P003 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.68■□□□□ 0.58
CNIH4Q9P003 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.67■□□□□ 0.58
CNIH4Q9P003 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.67■□□□□ 0.58
CNIH4Q9P003 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CNIH4Q9P003 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH4Q9P003 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH4Q9P003 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.67■□□□□ 0.58
CNIH4Q9P003 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.67■□□□□ 0.58
CNIH4Q9P003 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.67■□□□□ 0.58
CNIH4Q9P003 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CNIH4Q9P003 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.67■□□□□ 0.58
CNIH4Q9P003 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.67■□□□□ 0.58
CNIH4Q9P003 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH4Q9P003 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH4Q9P003 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH4Q9P003 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH4Q9P003 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CNIH4Q9P003 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH4Q9P003 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
CNIH4Q9P003 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.67■□□□□ 0.58
CNIH4Q9P003 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.67■□□□□ 0.58
CNIH4Q9P003 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CNIH4Q9P003 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CNIH4Q9P003 AC092720.2-201ENST00000602388 1665 ntBASIC18.66■□□□□ 0.58
CNIH4Q9P003 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH4Q9P003 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.66■□□□□ 0.58
CNIH4Q9P003 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH4Q9P003 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.66■□□□□ 0.58
CNIH4Q9P003 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH4Q9P003 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH4Q9P003 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH4Q9P003 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.66■□□□□ 0.58
CNIH4Q9P003 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.66■□□□□ 0.58
CNIH4Q9P003 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.66■□□□□ 0.58
CNIH4Q9P003 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.66■□□□□ 0.58
CNIH4Q9P003 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH4Q9P003 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.66■□□□□ 0.58
CNIH4Q9P003 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.66■□□□□ 0.58
CNIH4Q9P003 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH4Q9P003 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.66■□□□□ 0.58
CNIH4Q9P003 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH4Q9P003 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNIH4Q9P003 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH4Q9P003 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH4Q9P003 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH4Q9P003 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH4Q9P003 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH4Q9P003 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH4Q9P003 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.65■□□□□ 0.58
CNIH4Q9P003 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.65■□□□□ 0.58
CNIH4Q9P003 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.65■□□□□ 0.58
CNIH4Q9P003 RNA5SP413-201ENST00000516373 109 ntBASIC18.65■□□□□ 0.58
CNIH4Q9P003 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.65■□□□□ 0.58
CNIH4Q9P003 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.65■□□□□ 0.58
CNIH4Q9P003 C2orf69P4-201ENST00000565394 541 ntBASIC18.65■□□□□ 0.58
CNIH4Q9P003 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.65■□□□□ 0.58
CNIH4Q9P003 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.65■□□□□ 0.58
CNIH4Q9P003 MIR2861-201ENST00000636310 90 ntBASIC18.65■□□□□ 0.58
CNIH4Q9P003 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CNIH4Q9P003 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH4Q9P003 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH4Q9P003 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH4Q9P003 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH4Q9P003 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CNIH4Q9P003 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH4Q9P003 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
CNIH4Q9P003 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH4Q9P003 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNIH4Q9P003 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.64■□□□□ 0.58
CNIH4Q9P003 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CNIH4Q9P003 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.64■□□□□ 0.57
CNIH4Q9P003 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CNIH4Q9P003 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNIH4Q9P003 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNIH4Q9P003 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.64■□□□□ 0.57
CNIH4Q9P003 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.64■□□□□ 0.57
CNIH4Q9P003 HLA-B-256ENST00000639848 1089 ntBASIC18.64■□□□□ 0.57
CNIH4Q9P003 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
CNIH4Q9P003 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.64■□□□□ 0.57
CNIH4Q9P003 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.64■□□□□ 0.57
CNIH4Q9P003 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNIH4Q9P003 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNIH4Q9P003 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNIH4Q9P003 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CNIH4Q9P003 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH4Q9P003 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH4Q9P003 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.63■□□□□ 0.57
CNIH4Q9P003 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH4Q9P003 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH4Q9P003 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH4Q9P003 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.63■□□□□ 0.57
CNIH4Q9P003 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNIH4Q9P003 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.63■□□□□ 0.57
CNIH4Q9P003 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CNIH4Q9P003 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CNIH4Q9P003 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.63■□□□□ 0.57
CNIH4Q9P003 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.63■□□□□ 0.57
CNIH4Q9P003 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms