Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCAL1Q9NZC9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SMARCAL1Q9NZC9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.01■□□□□ 0.95
SMARCAL1Q9NZC9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCAL1Q9NZC9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 AC093503.3-201ENST00000624917 2352 ntBASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21■□□□□ 0.95
SMARCAL1Q9NZC9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 CCDC92B-201ENST00000575506 885 ntBASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 NEFHP1-201ENST00000412845 2629 ntBASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.99■□□□□ 0.95
SMARCAL1Q9NZC9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 TERF1P2-201ENST00000583350 1212 ntBASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCAL1Q9NZC9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.97■□□□□ 0.95
SMARCAL1Q9NZC9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SMARCAL1Q9NZC9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCAL1Q9NZC9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCAL1Q9NZC9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCAL1Q9NZC9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCAL1Q9NZC9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.96■□□□□ 0.95
SMARCAL1Q9NZC9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.96■□□□□ 0.95
SMARCAL1Q9NZC9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCAL1Q9NZC9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCAL1Q9NZC9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCAL1Q9NZC9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMARCAL1Q9NZC9 KRT18P14-201ENST00000534205 1250 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms