Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC28.8■■■□□ 2.2
SLC52A1Q9NWF4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SLC52A1Q9NWF4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
SLC52A1Q9NWF4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC28.8■■■□□ 2.2
SLC52A1Q9NWF4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC28.8■■■□□ 2.2
SLC52A1Q9NWF4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC28.8■■■□□ 2.2
SLC52A1Q9NWF4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SLC52A1Q9NWF4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC28.8■■■□□ 2.2
SLC52A1Q9NWF4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SLC52A1Q9NWF4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC28.8■■■□□ 2.2
SLC52A1Q9NWF4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
SLC52A1Q9NWF4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC28.79■■■□□ 2.2
SLC52A1Q9NWF4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC28.79■■■□□ 2.2
SLC52A1Q9NWF4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SLC52A1Q9NWF4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC28.79■■■□□ 2.2
SLC52A1Q9NWF4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC28.79■■■□□ 2.2
SLC52A1Q9NWF4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
SLC52A1Q9NWF4 WWOX-216ENST00000569818 525 ntBASIC28.79■■■□□ 2.2
SLC52A1Q9NWF4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
SLC52A1Q9NWF4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
SLC52A1Q9NWF4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
SLC52A1Q9NWF4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SLC52A1Q9NWF4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SLC52A1Q9NWF4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC28.78■■■□□ 2.2
SLC52A1Q9NWF4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC28.78■■■□□ 2.2
SLC52A1Q9NWF4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SLC52A1Q9NWF4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SLC52A1Q9NWF4 AC004980.1-204ENST00000429707 299 ntBASIC28.78■■■□□ 2.2
SLC52A1Q9NWF4 AC011506.1-201ENST00000474329 610 ntBASIC28.78■■■□□ 2.2
SLC52A1Q9NWF4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC28.78■■■□□ 2.2
SLC52A1Q9NWF4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC28.78■■■□□ 2.2
SLC52A1Q9NWF4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
SLC52A1Q9NWF4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SLC52A1Q9NWF4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SLC52A1Q9NWF4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SLC52A1Q9NWF4 AL024507.2-201ENST00000606070 2574 ntBASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
SLC52A1Q9NWF4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.2
SLC52A1Q9NWF4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC28.76■■■□□ 2.19
SLC52A1Q9NWF4 AC116351.2-201ENST00000606540 1585 ntBASIC28.76■■■□□ 2.19
SLC52A1Q9NWF4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SLC52A1Q9NWF4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SLC52A1Q9NWF4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC28.76■■■□□ 2.19
SLC52A1Q9NWF4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SLC52A1Q9NWF4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC28.76■■■□□ 2.19
SLC52A1Q9NWF4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC28.76■■■□□ 2.19
SLC52A1Q9NWF4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SLC52A1Q9NWF4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 AL121603.2-201ENST00000557373 2117 ntBASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 LIN28AP1-201ENST00000429574 405 ntBASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 ECEL1P2-202ENST00000465689 757 ntBASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 AC087388.1-201ENST00000571370 1112 ntBASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 TFP1-202ENST00000475455 1573 ntBASIC28.75■■■□□ 2.19
SLC52A1Q9NWF4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SLC52A1Q9NWF4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
SLC52A1Q9NWF4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
SLC52A1Q9NWF4 YBX1P10-201ENST00000444752 975 ntBASIC28.74■■■□□ 2.19
SLC52A1Q9NWF4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SLC52A1Q9NWF4 KRT18P16-201ENST00000510337 1294 ntBASIC28.74■■■□□ 2.19
SLC52A1Q9NWF4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SLC52A1Q9NWF4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC28.74■■■□□ 2.19
SLC52A1Q9NWF4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
SLC52A1Q9NWF4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
SLC52A1Q9NWF4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
SLC52A1Q9NWF4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SLC52A1Q9NWF4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SLC52A1Q9NWF4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SLC52A1Q9NWF4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SLC52A1Q9NWF4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SLC52A1Q9NWF4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC28.73■■■□□ 2.19
SLC52A1Q9NWF4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
SLC52A1Q9NWF4 FAM87A-204ENST00000613235 858 ntBASIC28.73■■■□□ 2.19
SLC52A1Q9NWF4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SLC52A1Q9NWF4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms