Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
ECHDC1Q9NTX5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.39■■□□□ 1.5
ECHDC1Q9NTX5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ECHDC1Q9NTX5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
ECHDC1Q9NTX5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
ECHDC1Q9NTX5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ECHDC1Q9NTX5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.39■■□□□ 1.5
ECHDC1Q9NTX5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
ECHDC1Q9NTX5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.39■■□□□ 1.49
ECHDC1Q9NTX5 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.39■■□□□ 1.49
ECHDC1Q9NTX5 UNC93B5-201ENST00000530315 699 ntBASIC24.39■■□□□ 1.49
ECHDC1Q9NTX5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.39■■□□□ 1.49
ECHDC1Q9NTX5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ECHDC1Q9NTX5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ECHDC1Q9NTX5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ECHDC1Q9NTX5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC24.39■■□□□ 1.49
ECHDC1Q9NTX5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC24.38■■□□□ 1.49
ECHDC1Q9NTX5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ECHDC1Q9NTX5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ECHDC1Q9NTX5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ECHDC1Q9NTX5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC24.36■■□□□ 1.49
ECHDC1Q9NTX5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC24.36■■□□□ 1.49
ECHDC1Q9NTX5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ECHDC1Q9NTX5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ECHDC1Q9NTX5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.36■■□□□ 1.49
ECHDC1Q9NTX5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.36■■□□□ 1.49
ECHDC1Q9NTX5 SOX15-203ENST00000570788 1093 ntBASIC24.36■■□□□ 1.49
ECHDC1Q9NTX5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC24.36■■□□□ 1.49
ECHDC1Q9NTX5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 UNC93B4-201ENST00000505679 747 ntBASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
ECHDC1Q9NTX5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ECHDC1Q9NTX5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.34■■□□□ 1.49
ECHDC1Q9NTX5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ECHDC1Q9NTX5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ECHDC1Q9NTX5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC24.34■■□□□ 1.49
ECHDC1Q9NTX5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ECHDC1Q9NTX5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC24.34■■□□□ 1.49
ECHDC1Q9NTX5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.34■■□□□ 1.49
ECHDC1Q9NTX5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ECHDC1Q9NTX5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.34■■□□□ 1.49
ECHDC1Q9NTX5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.34■■□□□ 1.49
ECHDC1Q9NTX5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
ECHDC1Q9NTX5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC24.34■■□□□ 1.49
ECHDC1Q9NTX5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ECHDC1Q9NTX5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.33■■□□□ 1.49
ECHDC1Q9NTX5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ECHDC1Q9NTX5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms