Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 AL158211.5-201ENST00000623583 2518 ntBASIC19.95■□□□□ 0.78
TREX1Q9NSU2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.95■□□□□ 0.78
TREX1Q9NSU2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TREX1Q9NSU2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TREX1Q9NSU2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.94■□□□□ 0.78
TREX1Q9NSU2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TREX1Q9NSU2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.94■□□□□ 0.78
TREX1Q9NSU2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TREX1Q9NSU2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TREX1Q9NSU2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.94■□□□□ 0.78
TREX1Q9NSU2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.94■□□□□ 0.78
TREX1Q9NSU2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TREX1Q9NSU2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
TREX1Q9NSU2 NCF1B-203ENST00000435988 1254 ntBASIC19.94■□□□□ 0.78
TREX1Q9NSU2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.94■□□□□ 0.78
TREX1Q9NSU2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.94■□□□□ 0.78
TREX1Q9NSU2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TREX1Q9NSU2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TREX1Q9NSU2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 TREX1-205ENST00000625293 1783 ntBASIC19.93■□□□□ 0.78
TREX1Q9NSU2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TREX1Q9NSU2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 AC092118.2-201ENST00000613495 667 ntBASIC19.92■□□□□ 0.78
TREX1Q9NSU2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TREX1Q9NSU2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TREX1Q9NSU2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TREX1Q9NSU2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TREX1Q9NSU2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TREX1Q9NSU2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TREX1Q9NSU2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.91■□□□□ 0.78
TREX1Q9NSU2 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.91■□□□□ 0.78
TREX1Q9NSU2 TSPY6P-201ENST00000448518 926 ntBASIC19.91■□□□□ 0.78
TREX1Q9NSU2 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.91■□□□□ 0.78
TREX1Q9NSU2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.91■□□□□ 0.78
TREX1Q9NSU2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TREX1Q9NSU2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TREX1Q9NSU2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms