Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.35■■□□□ 1.01
CISHQ9NSE2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.35■■□□□ 1.01
CISHQ9NSE2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.35■■□□□ 1.01
CISHQ9NSE2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CISHQ9NSE2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CISHQ9NSE2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CISHQ9NSE2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CISHQ9NSE2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.35■■□□□ 1.01
CISHQ9NSE2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.35■■□□□ 1.01
CISHQ9NSE2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CISHQ9NSE2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CISHQ9NSE2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CISHQ9NSE2 AL691432.2-201ENST00000607222 2038 ntBASIC21.34■■□□□ 1.01
CISHQ9NSE2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
CISHQ9NSE2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CISHQ9NSE2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CISHQ9NSE2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CISHQ9NSE2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CISHQ9NSE2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CISHQ9NSE2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CISHQ9NSE2 RNA5SP413-201ENST00000516373 109 ntBASIC21.34■■□□□ 1.01
CISHQ9NSE2 AC006557.6-201ENST00000623071 864 ntBASIC21.34■■□□□ 1.01
CISHQ9NSE2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CISHQ9NSE2 KRT16P6-202ENST00000425692 1426 ntBASIC21.34■■□□□ 1.01
CISHQ9NSE2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CISHQ9NSE2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.34■■□□□ 1.01
CISHQ9NSE2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CISHQ9NSE2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CISHQ9NSE2 TCF3P1-201ENST00000423021 1937 ntBASIC21.33■■□□□ 1.01
CISHQ9NSE2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.33■■□□□ 1.01
CISHQ9NSE2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CISHQ9NSE2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CISHQ9NSE2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CISHQ9NSE2 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.33■■□□□ 1.01
CISHQ9NSE2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CISHQ9NSE2 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.33■■□□□ 1.01
CISHQ9NSE2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.33■■□□□ 1.01
CISHQ9NSE2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.33■■□□□ 1.01
CISHQ9NSE2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.33■■□□□ 1.01
CISHQ9NSE2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CISHQ9NSE2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CISHQ9NSE2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CISHQ9NSE2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.33■■□□□ 1
CISHQ9NSE2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CISHQ9NSE2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.33■■□□□ 1
CISHQ9NSE2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.32■■□□□ 1
CISHQ9NSE2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CISHQ9NSE2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.32■■□□□ 1
CISHQ9NSE2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CISHQ9NSE2 PCDHAC2-203ENST00000615316 3011 ntBASIC21.32■■□□□ 1
CISHQ9NSE2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.32■■□□□ 1
CISHQ9NSE2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.32■■□□□ 1
CISHQ9NSE2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.32■■□□□ 1
CISHQ9NSE2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.32■■□□□ 1
CISHQ9NSE2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CISHQ9NSE2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CISHQ9NSE2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CISHQ9NSE2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.32■■□□□ 1
CISHQ9NSE2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.32■■□□□ 1
CISHQ9NSE2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.32■■□□□ 1
CISHQ9NSE2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.32■■□□□ 1
CISHQ9NSE2 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.32■■□□□ 1
CISHQ9NSE2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.32■■□□□ 1
CISHQ9NSE2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.32■■□□□ 1
CISHQ9NSE2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.32■■□□□ 1
CISHQ9NSE2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.32■■□□□ 1
CISHQ9NSE2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CISHQ9NSE2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.32■■□□□ 1
CISHQ9NSE2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
CISHQ9NSE2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.32■■□□□ 1
CISHQ9NSE2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
CISHQ9NSE2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.32■■□□□ 1
CISHQ9NSE2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CISHQ9NSE2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.32■■□□□ 1
CISHQ9NSE2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CISHQ9NSE2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.31■■□□□ 1
CISHQ9NSE2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CISHQ9NSE2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CISHQ9NSE2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CISHQ9NSE2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.31■■□□□ 1
CISHQ9NSE2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CISHQ9NSE2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.31■■□□□ 1
CISHQ9NSE2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.31■■□□□ 1
CISHQ9NSE2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.31■■□□□ 1
CISHQ9NSE2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.31■■□□□ 1
CISHQ9NSE2 UNC93B5-201ENST00000530315 699 ntBASIC21.31■■□□□ 1
CISHQ9NSE2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CISHQ9NSE2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.31■■□□□ 1
CISHQ9NSE2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.31■■□□□ 1
CISHQ9NSE2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.31■■□□□ 1
CISHQ9NSE2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CISHQ9NSE2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CISHQ9NSE2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CISHQ9NSE2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.3■■□□□ 1
CISHQ9NSE2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
CISHQ9NSE2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CISHQ9NSE2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CISHQ9NSE2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CISHQ9NSE2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CISHQ9NSE2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms