Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RPAP3Q9H6T3 RCN1P1-201ENST00000400413 996 ntBASIC23.1■■□□□ 1.29
RPAP3Q9H6T3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.1■■□□□ 1.29
RPAP3Q9H6T3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
RPAP3Q9H6T3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
RPAP3Q9H6T3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RPAP3Q9H6T3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 RBM17P1-201ENST00000453646 1190 ntBASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 REXO1L10P-201ENST00000615707 1290 ntBASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 DPP3P2-201ENST00000416030 1696 ntBASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
RPAP3Q9H6T3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPAP3Q9H6T3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.08■■□□□ 1.29
RPAP3Q9H6T3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPAP3Q9H6T3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPAP3Q9H6T3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPAP3Q9H6T3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPAP3Q9H6T3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.08■■□□□ 1.29
RPAP3Q9H6T3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.08■■□□□ 1.29
RPAP3Q9H6T3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.08■■□□□ 1.29
RPAP3Q9H6T3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.08■■□□□ 1.29
RPAP3Q9H6T3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPAP3Q9H6T3 AC006128.1-201ENST00000624704 1661 ntBASIC23.08■■□□□ 1.29
RPAP3Q9H6T3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.08■■□□□ 1.29
RPAP3Q9H6T3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPAP3Q9H6T3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPAP3Q9H6T3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RPAP3Q9H6T3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
RPAP3Q9H6T3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.08■■□□□ 1.28
RPAP3Q9H6T3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.28
RPAP3Q9H6T3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RPAP3Q9H6T3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 AC079598.2-202ENST00000546624 1451 ntBASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 CR392000.1-201ENST00000624770 1228 ntBASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.07■■□□□ 1.28
RPAP3Q9H6T3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPAP3Q9H6T3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RPAP3Q9H6T3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RPAP3Q9H6T3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RPAP3Q9H6T3 NIFKP9-201ENST00000419265 221 ntBASIC23.06■■□□□ 1.28
RPAP3Q9H6T3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.06■■□□□ 1.28
RPAP3Q9H6T3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RPAP3Q9H6T3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RPAP3Q9H6T3 AP000525.1-201ENST00000608286 694 ntBASIC23.06■■□□□ 1.28
RPAP3Q9H6T3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.06■■□□□ 1.28
RPAP3Q9H6T3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RPAP3Q9H6T3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPAP3Q9H6T3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RPAP3Q9H6T3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPAP3Q9H6T3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP3Q9H6T3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.05■■□□□ 1.28
RPAP3Q9H6T3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
RPAP3Q9H6T3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP3Q9H6T3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP3Q9H6T3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.05■■□□□ 1.28
RPAP3Q9H6T3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.05■■□□□ 1.28
RPAP3Q9H6T3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.05■■□□□ 1.28
RPAP3Q9H6T3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.05■■□□□ 1.28
RPAP3Q9H6T3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.05■■□□□ 1.28
RPAP3Q9H6T3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP3Q9H6T3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP3Q9H6T3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP3Q9H6T3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPAP3Q9H6T3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.05■■□□□ 1.28
RPAP3Q9H6T3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RPAP3Q9H6T3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.04■■□□□ 1.28
RPAP3Q9H6T3 UNC93B2-201ENST00000285383 730 ntBASIC23.04■■□□□ 1.28
RPAP3Q9H6T3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
RPAP3Q9H6T3 KSR1P1-201ENST00000446298 240 ntBASIC23.04■■□□□ 1.28
RPAP3Q9H6T3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms