Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PIF1Q9H611 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PIF1Q9H611 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.02■□□□□ 0.64
PIF1Q9H611 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PIF1Q9H611 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PIF1Q9H611 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PIF1Q9H611 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.02■□□□□ 0.64
PIF1Q9H611 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PIF1Q9H611 DUX4L2-201ENST00000561772 1275 ntBASIC19.02■□□□□ 0.64
PIF1Q9H611 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
PIF1Q9H611 DUX4L6-201ENST00000626483 1275 ntBASIC19.02■□□□□ 0.64
PIF1Q9H611 DUX4L1-201ENST00000627662 1275 ntBASIC19.02■□□□□ 0.64
PIF1Q9H611 DUX4L8-201ENST00000629013 1275 ntBASIC19.02■□□□□ 0.64
PIF1Q9H611 DUX4L3-201ENST00000630187 1275 ntBASIC19.02■□□□□ 0.64
PIF1Q9H611 DUX4L7-201ENST00000630678 1275 ntBASIC19.02■□□□□ 0.64
PIF1Q9H611 DUX4L5-201ENST00000630834 1275 ntBASIC19.02■□□□□ 0.64
PIF1Q9H611 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.02■□□□□ 0.64
PIF1Q9H611 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PIF1Q9H611 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.02■□□□□ 0.64
PIF1Q9H611 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PIF1Q9H611 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.02■□□□□ 0.64
PIF1Q9H611 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.02■□□□□ 0.63
PIF1Q9H611 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PIF1Q9H611 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.02■□□□□ 0.63
PIF1Q9H611 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PIF1Q9H611 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PIF1Q9H611 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.01■□□□□ 0.63
PIF1Q9H611 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PIF1Q9H611 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.01■□□□□ 0.63
PIF1Q9H611 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PIF1Q9H611 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PIF1Q9H611 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.01■□□□□ 0.63
PIF1Q9H611 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.01■□□□□ 0.63
PIF1Q9H611 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.01■□□□□ 0.63
PIF1Q9H611 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.01■□□□□ 0.63
PIF1Q9H611 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.01■□□□□ 0.63
PIF1Q9H611 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PIF1Q9H611 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
PIF1Q9H611 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.01■□□□□ 0.63
PIF1Q9H611 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.01■□□□□ 0.63
PIF1Q9H611 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.01■□□□□ 0.63
PIF1Q9H611 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
PIF1Q9H611 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.01■□□□□ 0.63
PIF1Q9H611 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PIF1Q9H611 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.01■□□□□ 0.63
PIF1Q9H611 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.01■□□□□ 0.63
PIF1Q9H611 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PIF1Q9H611 AC093484.2-201ENST00000580996 2166 ntBASIC19■□□□□ 0.63
PIF1Q9H611 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PIF1Q9H611 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19■□□□□ 0.63
PIF1Q9H611 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19■□□□□ 0.63
PIF1Q9H611 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PIF1Q9H611 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19■□□□□ 0.63
PIF1Q9H611 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19■□□□□ 0.63
PIF1Q9H611 AC005332.7-201ENST00000614046 2005 ntBASIC19■□□□□ 0.63
PIF1Q9H611 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PIF1Q9H611 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PIF1Q9H611 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PIF1Q9H611 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PIF1Q9H611 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19■□□□□ 0.63
PIF1Q9H611 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19■□□□□ 0.63
PIF1Q9H611 SP2-202ENST00000613139 908 ntTSL 5 BASIC19■□□□□ 0.63
PIF1Q9H611 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19■□□□□ 0.63
PIF1Q9H611 BX119927.1-201ENST00000636596 1552 ntBASIC19■□□□□ 0.63
PIF1Q9H611 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19■□□□□ 0.63
PIF1Q9H611 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19■□□□□ 0.63
PIF1Q9H611 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PIF1Q9H611 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PIF1Q9H611 TMEM179-206ENST00000616017 1645 ntBASIC19■□□□□ 0.63
PIF1Q9H611 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PIF1Q9H611 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PIF1Q9H611 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PIF1Q9H611 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.99■□□□□ 0.63
PIF1Q9H611 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PIF1Q9H611 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
PIF1Q9H611 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
PIF1Q9H611 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PIF1Q9H611 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PIF1Q9H611 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PIF1Q9H611 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PIF1Q9H611 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PIF1Q9H611 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PIF1Q9H611 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.99■□□□□ 0.63
PIF1Q9H611 AC091799.1-201ENST00000422823 811 ntBASIC18.99■□□□□ 0.63
PIF1Q9H611 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.99■□□□□ 0.63
PIF1Q9H611 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.99■□□□□ 0.63
PIF1Q9H611 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.99■□□□□ 0.63
PIF1Q9H611 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PIF1Q9H611 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PIF1Q9H611 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
PIF1Q9H611 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.99■□□□□ 0.63
PIF1Q9H611 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.99■□□□□ 0.63
PIF1Q9H611 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PIF1Q9H611 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.99■□□□□ 0.63
PIF1Q9H611 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.99■□□□□ 0.63
PIF1Q9H611 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PIF1Q9H611 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
PIF1Q9H611 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.98■□□□□ 0.63
PIF1Q9H611 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PIF1Q9H611 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms