Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.22■□□□□ 0.67
SPTBN4Q9H254 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPTBN4Q9H254 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPTBN4Q9H254 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SPTBN4Q9H254 TSPY12P-201ENST00000421279 868 ntBASIC19.22■□□□□ 0.67
SPTBN4Q9H254 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.22■□□□□ 0.67
SPTBN4Q9H254 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.22■□□□□ 0.67
SPTBN4Q9H254 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPTBN4Q9H254 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 SLC25A1P2-201ENST00000430693 912 ntBASIC19.21■□□□□ 0.67
SPTBN4Q9H254 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPTBN4Q9H254 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.66
SPTBN4Q9H254 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.21■□□□□ 0.66
SPTBN4Q9H254 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.66
SPTBN4Q9H254 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPTBN4Q9H254 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPTBN4Q9H254 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SPTBN4Q9H254 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.2■□□□□ 0.66
SPTBN4Q9H254 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPTBN4Q9H254 RNA5SP419-201ENST00000515908 135 ntBASIC19.2■□□□□ 0.66
SPTBN4Q9H254 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.2■□□□□ 0.66
SPTBN4Q9H254 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.2■□□□□ 0.66
SPTBN4Q9H254 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.2■□□□□ 0.66
SPTBN4Q9H254 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPTBN4Q9H254 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPTBN4Q9H254 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.2■□□□□ 0.66
SPTBN4Q9H254 PMS2P2-201ENST00000425039 1128 ntBASIC19.2■□□□□ 0.66
SPTBN4Q9H254 YBX1P10-201ENST00000444752 975 ntBASIC19.2■□□□□ 0.66
SPTBN4Q9H254 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.2■□□□□ 0.66
SPTBN4Q9H254 AC096733.2-201ENST00000609937 1394 ntBASIC19.2■□□□□ 0.66
SPTBN4Q9H254 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPTBN4Q9H254 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SPTBN4Q9H254 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTBN4Q9H254 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPTBN4Q9H254 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.19■□□□□ 0.66
SPTBN4Q9H254 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.19■□□□□ 0.66
SPTBN4Q9H254 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.19■□□□□ 0.66
SPTBN4Q9H254 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTBN4Q9H254 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTBN4Q9H254 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTBN4Q9H254 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPTBN4Q9H254 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.19■□□□□ 0.66
SPTBN4Q9H254 AC079776.4-201ENST00000511039 504 ntBASIC19.19■□□□□ 0.66
SPTBN4Q9H254 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPTBN4Q9H254 AC010542.4-201ENST00000563151 1910 ntBASIC19.19■□□□□ 0.66
SPTBN4Q9H254 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
SPTBN4Q9H254 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.18■□□□□ 0.66
SPTBN4Q9H254 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SPTBN4Q9H254 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTBN4Q9H254 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.18■□□□□ 0.66
SPTBN4Q9H254 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.18■□□□□ 0.66
SPTBN4Q9H254 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SPTBN4Q9H254 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SPTBN4Q9H254 AC092068.2-201ENST00000590491 1708 ntBASIC19.18■□□□□ 0.66
SPTBN4Q9H254 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPTBN4Q9H254 AC092329.2-201ENST00000598402 547 ntBASIC19.18■□□□□ 0.66
SPTBN4Q9H254 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.18■□□□□ 0.66
SPTBN4Q9H254 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 AC026471.6-201ENST00000622954 1905 ntBASIC19.17■□□□□ 0.66
SPTBN4Q9H254 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 SLC25A1P1-201ENST00000528351 927 ntBASIC19.17■□□□□ 0.66
SPTBN4Q9H254 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 AC140113.2-201ENST00000604370 208 ntBASIC19.17■□□□□ 0.66
SPTBN4Q9H254 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 LINC01124-201ENST00000409786 2117 ntBASIC19.17■□□□□ 0.66
SPTBN4Q9H254 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPTBN4Q9H254 ZNF444P1-201ENST00000559497 298 ntBASIC19.17■□□□□ 0.66
SPTBN4Q9H254 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPTBN4Q9H254 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPTBN4Q9H254 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SPTBN4Q9H254 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms