Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 CROCCP5-201ENST00000436658 830 ntBASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 AC007322.4-201ENST00000509611 723 ntBASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.65■■□□□ 1.06
NUCKS1Q9H1E3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.64■■□□□ 1.06
NUCKS1Q9H1E3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NUCKS1Q9H1E3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.64■■□□□ 1.06
NUCKS1Q9H1E3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.06
NUCKS1Q9H1E3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
NUCKS1Q9H1E3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
NUCKS1Q9H1E3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NUCKS1Q9H1E3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NUCKS1Q9H1E3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NUCKS1Q9H1E3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NUCKS1Q9H1E3 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.64■■□□□ 1.05
NUCKS1Q9H1E3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NUCKS1Q9H1E3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.64■■□□□ 1.05
NUCKS1Q9H1E3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NUCKS1Q9H1E3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NUCKS1Q9H1E3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.64■■□□□ 1.05
NUCKS1Q9H1E3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
NUCKS1Q9H1E3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 AC231657.2-201ENST00000624556 255 ntBASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.63■■□□□ 1.05
NUCKS1Q9H1E3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 MIR663A-201ENST00000385250 93 ntBASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 AC013268.1-206ENST00000638368 961 ntBASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 AC112229.1-201ENST00000639295 961 ntBASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 AL158211.5-201ENST00000623583 2518 ntBASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
NUCKS1Q9H1E3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 AC007322.1-201ENST00000426983 750 ntBASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 AC100791.3-201ENST00000617619 330 ntBASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NUCKS1Q9H1E3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 AC006970.2-201ENST00000450065 779 ntBASIC21.6■■□□□ 1.05
NUCKS1Q9H1E3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms