Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NICN1Q9BSH3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NICN1Q9BSH3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 AP000974.1-201ENST00000623909 2387 ntBASIC17.11■□□□□ 0.33
NICN1Q9BSH3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 FAM21FP-204ENST00000608637 956 ntBASIC17.11■□□□□ 0.33
NICN1Q9BSH3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NICN1Q9BSH3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 TREX1-205ENST00000625293 1783 ntBASIC17.1■□□□□ 0.33
NICN1Q9BSH3 BX323043.1-201ENST00000641006 1765 ntBASIC17.1■□□□□ 0.33
NICN1Q9BSH3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.1■□□□□ 0.33
NICN1Q9BSH3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
NICN1Q9BSH3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 AC005332.7-201ENST00000614046 2005 ntBASIC17.09■□□□□ 0.33
NICN1Q9BSH3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 AC093484.2-201ENST00000580996 2166 ntBASIC17.09■□□□□ 0.33
NICN1Q9BSH3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 TERF1P2-201ENST00000583350 1212 ntBASIC17.09■□□□□ 0.33
NICN1Q9BSH3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 AC004854.2-201ENST00000608450 1441 ntBASIC17.09■□□□□ 0.33
NICN1Q9BSH3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.09■□□□□ 0.33
NICN1Q9BSH3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
NICN1Q9BSH3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NICN1Q9BSH3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.08■□□□□ 0.33
NICN1Q9BSH3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NICN1Q9BSH3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NICN1Q9BSH3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms