Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.46■□□□□ 0.71
PKP4Q99569 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.46■□□□□ 0.71
PKP4Q99569 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.46■□□□□ 0.71
PKP4Q99569 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP4Q99569 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP4Q99569 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.46■□□□□ 0.71
PKP4Q99569 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP4Q99569 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.46■□□□□ 0.71
PKP4Q99569 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PKP4Q99569 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PKP4Q99569 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP4Q99569 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PKP4Q99569 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP4Q99569 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP4Q99569 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP4Q99569 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PKP4Q99569 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP4Q99569 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKP4Q99569 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKP4Q99569 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.45■□□□□ 0.7
PKP4Q99569 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
PKP4Q99569 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.45■□□□□ 0.7
PKP4Q99569 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PKP4Q99569 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKP4Q99569 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.45■□□□□ 0.7
PKP4Q99569 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP4Q99569 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP4Q99569 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.45■□□□□ 0.7
PKP4Q99569 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKP4Q99569 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKP4Q99569 TCF3P1-201ENST00000423021 1937 ntBASIC19.45■□□□□ 0.7
PKP4Q99569 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKP4Q99569 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.44■□□□□ 0.7
PKP4Q99569 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.44■□□□□ 0.7
PKP4Q99569 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PKP4Q99569 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.44■□□□□ 0.7
PKP4Q99569 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.44■□□□□ 0.7
PKP4Q99569 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PKP4Q99569 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP4Q99569 PCDHAC2-203ENST00000615316 3011 ntBASIC19.43■□□□□ 0.7
PKP4Q99569 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PKP4Q99569 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP4Q99569 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.43■□□□□ 0.7
PKP4Q99569 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP4Q99569 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PKP4Q99569 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PKP4Q99569 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PKP4Q99569 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP4Q99569 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.43■□□□□ 0.7
PKP4Q99569 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.43■□□□□ 0.7
PKP4Q99569 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP4Q99569 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP4Q99569 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.43■□□□□ 0.7
PKP4Q99569 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PKP4Q99569 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP4Q99569 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP4Q99569 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.43■□□□□ 0.7
PKP4Q99569 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.43■□□□□ 0.7
PKP4Q99569 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.43■□□□□ 0.7
PKP4Q99569 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.43■□□□□ 0.7
PKP4Q99569 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PKP4Q99569 HLA-B-256ENST00000639848 1089 ntBASIC19.43■□□□□ 0.7
PKP4Q99569 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP4Q99569 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PKP4Q99569 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PKP4Q99569 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.43■□□□□ 0.7
PKP4Q99569 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PKP4Q99569 AL691432.2-201ENST00000607222 2038 ntBASIC19.42■□□□□ 0.7
PKP4Q99569 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP4Q99569 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.42■□□□□ 0.7
PKP4Q99569 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP4Q99569 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PKP4Q99569 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP4Q99569 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
PKP4Q99569 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP4Q99569 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP4Q99569 AC092368.3-202ENST00000574180 1591 ntBASIC19.42■□□□□ 0.7
PKP4Q99569 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.42■□□□□ 0.7
PKP4Q99569 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP4Q99569 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PKP4Q99569 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.42■□□□□ 0.7
PKP4Q99569 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PKP4Q99569 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.42■□□□□ 0.7
PKP4Q99569 AC005829.2-201ENST00000571422 1056 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms