Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH15Q96QU1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH15Q96QU1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PCDH15Q96QU1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
PCDH15Q96QU1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH15Q96QU1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH15Q96QU1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH15Q96QU1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PCDH15Q96QU1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH15Q96QU1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDH15Q96QU1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.59■□□□□ 0.73
PCDH15Q96QU1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH15Q96QU1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH15Q96QU1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH15Q96QU1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH15Q96QU1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH15Q96QU1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDH15Q96QU1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PCDH15Q96QU1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH15Q96QU1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH15Q96QU1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDH15Q96QU1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDH15Q96QU1 AC104076.2-201ENST00000448912 469 ntBASIC19.58■□□□□ 0.73
PCDH15Q96QU1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
PCDH15Q96QU1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDH15Q96QU1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH15Q96QU1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PCDH15Q96QU1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH15Q96QU1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH15Q96QU1 FEM1AP4-201ENST00000443167 1987 ntBASIC19.58■□□□□ 0.72
PCDH15Q96QU1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH15Q96QU1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH15Q96QU1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH15Q96QU1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH15Q96QU1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDH15Q96QU1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDH15Q96QU1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH15Q96QU1 MESTP1-201ENST00000404287 994 ntBASIC19.57■□□□□ 0.72
PCDH15Q96QU1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDH15Q96QU1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDH15Q96QU1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH15Q96QU1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH15Q96QU1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH15Q96QU1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH15Q96QU1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH15Q96QU1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH15Q96QU1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 AL137013.1-201ENST00000432946 1228 ntBASIC19.56■□□□□ 0.72
PCDH15Q96QU1 AC010203.1-204ENST00000548782 407 ntBASIC19.56■□□□□ 0.72
PCDH15Q96QU1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 LINC00565-201ENST00000562710 2331 ntBASIC19.56■□□□□ 0.72
PCDH15Q96QU1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDH15Q96QU1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDH15Q96QU1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH15Q96QU1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH15Q96QU1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDH15Q96QU1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDH15Q96QU1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH15Q96QU1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH15Q96QU1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH15Q96QU1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDH15Q96QU1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms