Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CSPG4P5Q96PW8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CSPG4P5Q96PW8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CSPG4P5Q96PW8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG4P5Q96PW8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG4P5Q96PW8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.6■□□□□ 0.89
CSPG4P5Q96PW8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CSPG4P5Q96PW8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG4P5Q96PW8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG4P5Q96PW8 AC142086.2-201ENST00000569753 217 ntBASIC20.6■□□□□ 0.89
CSPG4P5Q96PW8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
CSPG4P5Q96PW8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.6■□□□□ 0.89
CSPG4P5Q96PW8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.6■□□□□ 0.89
CSPG4P5Q96PW8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSPG4P5Q96PW8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.6■□□□□ 0.89
CSPG4P5Q96PW8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSPG4P5Q96PW8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 TMEM179-206ENST00000616017 1645 ntBASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 HLA-L-209ENST00000420110 1011 ntBASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 AC073210.2-201ENST00000430369 194 ntBASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 AC097658.1-201ENST00000475555 843 ntBASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.58■□□□□ 0.89
CSPG4P5Q96PW8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.88
CSPG4P5Q96PW8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CSPG4P5Q96PW8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.58■□□□□ 0.88
CSPG4P5Q96PW8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CSPG4P5Q96PW8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CSPG4P5Q96PW8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms