Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 FAAHP1-202ENST00000446499 1238 ntBASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 AC009078.2-202ENST00000463353 338 ntBASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 COX11P1-201ENST00000489116 835 ntBASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNTNAP3BQ96NU0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 KRT18P13-201ENST00000400056 1290 ntBASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 CKBP1-201ENST00000565489 1086 ntBASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 PRELID1P1-202ENST00000567272 903 ntBASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNTNAP3BQ96NU0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 KRT16P1-201ENST00000399124 1418 ntBASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 HMGA1P5-201ENST00000412453 271 ntBASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 KSR1P1-201ENST00000446298 240 ntBASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNTNAP3BQ96NU0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 AC008622.2-201ENST00000617006 1229 ntBASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 AC233723.2-201ENST00000623798 2106 ntBASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CNTNAP3BQ96NU0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP3BQ96NU0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP3BQ96NU0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP3BQ96NU0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms