Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CFAP53Q96M91 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC26.74■■□□□ 1.87
CFAP53Q96M91 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CFAP53Q96M91 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
CFAP53Q96M91 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.74■■□□□ 1.87
CFAP53Q96M91 RN7SL471P-201ENST00000580476 299 ntBASIC26.74■■□□□ 1.87
CFAP53Q96M91 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC26.74■■□□□ 1.87
CFAP53Q96M91 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CFAP53Q96M91 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CFAP53Q96M91 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP53Q96M91 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC26.73■■□□□ 1.87
CFAP53Q96M91 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC26.73■■□□□ 1.87
CFAP53Q96M91 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP53Q96M91 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP53Q96M91 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP53Q96M91 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP53Q96M91 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC26.73■■□□□ 1.87
CFAP53Q96M91 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC26.73■■□□□ 1.87
CFAP53Q96M91 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP53Q96M91 BX119927.1-201ENST00000636596 1552 ntBASIC26.73■■□□□ 1.87
CFAP53Q96M91 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP53Q96M91 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP53Q96M91 MTDHP1-201ENST00000605323 784 ntBASIC26.73■■□□□ 1.87
CFAP53Q96M91 AL121829.2-201ENST00000620908 328 ntBASIC26.73■■□□□ 1.87
CFAP53Q96M91 AL121906.2-201ENST00000621597 723 ntBASIC26.73■■□□□ 1.87
CFAP53Q96M91 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CFAP53Q96M91 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
CFAP53Q96M91 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC26.73■■□□□ 1.87
CFAP53Q96M91 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
CFAP53Q96M91 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC26.73■■□□□ 1.87
CFAP53Q96M91 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
CFAP53Q96M91 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC26.72■■□□□ 1.87
CFAP53Q96M91 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CFAP53Q96M91 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CFAP53Q96M91 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC26.72■■□□□ 1.87
CFAP53Q96M91 AC098590.1-201ENST00000468126 897 ntBASIC26.72■■□□□ 1.87
CFAP53Q96M91 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC26.72■■□□□ 1.87
CFAP53Q96M91 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CFAP53Q96M91 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CFAP53Q96M91 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC26.72■■□□□ 1.87
CFAP53Q96M91 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC26.71■■□□□ 1.87
CFAP53Q96M91 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
CFAP53Q96M91 AL162377.1-201ENST00000618844 1793 ntBASIC26.71■■□□□ 1.87
CFAP53Q96M91 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CFAP53Q96M91 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
CFAP53Q96M91 AC092667.1-201ENST00000434301 2586 ntBASIC26.71■■□□□ 1.87
CFAP53Q96M91 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
CFAP53Q96M91 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
CFAP53Q96M91 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
CFAP53Q96M91 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CFAP53Q96M91 CALM3-202ENST00000391918 702 ntTSL 2 BASIC26.71■■□□□ 1.87
CFAP53Q96M91 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.71■■□□□ 1.87
CFAP53Q96M91 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CFAP53Q96M91 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC26.71■■□□□ 1.87
CFAP53Q96M91 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC26.71■■□□□ 1.87
CFAP53Q96M91 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CFAP53Q96M91 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CFAP53Q96M91 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP53Q96M91 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
CFAP53Q96M91 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP53Q96M91 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC26.7■■□□□ 1.86
CFAP53Q96M91 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.7■■□□□ 1.86
CFAP53Q96M91 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC26.7■■□□□ 1.86
CFAP53Q96M91 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
CFAP53Q96M91 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP53Q96M91 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP53Q96M91 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP53Q96M91 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CFAP53Q96M91 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
CFAP53Q96M91 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CFAP53Q96M91 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC26.69■■□□□ 1.86
CFAP53Q96M91 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CFAP53Q96M91 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
CFAP53Q96M91 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CFAP53Q96M91 GCSHP5-201ENST00000443090 522 ntBASIC26.69■■□□□ 1.86
CFAP53Q96M91 C1QBPP2-201ENST00000528754 825 ntBASIC26.69■■□□□ 1.86
CFAP53Q96M91 PRKY-204ENST00000533551 1019 ntBASIC26.69■■□□□ 1.86
CFAP53Q96M91 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC26.69■■□□□ 1.86
CFAP53Q96M91 AC142381.4-202ENST00000563973 229 ntBASIC26.69■■□□□ 1.86
CFAP53Q96M91 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC26.69■■□□□ 1.86
CFAP53Q96M91 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
CFAP53Q96M91 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFAP53Q96M91 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC26.68■■□□□ 1.86
CFAP53Q96M91 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFAP53Q96M91 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFAP53Q96M91 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC26.68■■□□□ 1.86
CFAP53Q96M91 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CFAP53Q96M91 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFAP53Q96M91 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFAP53Q96M91 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFAP53Q96M91 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CFAP53Q96M91 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC26.68■■□□□ 1.86
CFAP53Q96M91 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC26.68■■□□□ 1.86
CFAP53Q96M91 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC26.68■■□□□ 1.86
CFAP53Q96M91 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
CFAP53Q96M91 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.68■■□□□ 1.86
CFAP53Q96M91 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC26.68■■□□□ 1.86
CFAP53Q96M91 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC26.68■■□□□ 1.86
CFAP53Q96M91 LINC01006-201ENST00000333319 2292 ntBASIC26.68■■□□□ 1.86
CFAP53Q96M91 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms