Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 AC239809.2-201ENST00000415381 517 ntBASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 RPPH1-201ENST00000516869 333 ntBASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 PRKY-204ENST00000533551 1019 ntBASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
SMARCD1Q96GM5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMARCD1Q96GM5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 AL512408.1-201ENST00000569378 2000 ntBASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 BX119927.1-201ENST00000636596 1552 ntBASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 FAM197Y4-202ENST00000622692 608 ntBASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 AL023875.1-201ENST00000640777 796 ntBASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMARCD1Q96GM5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
SMARCD1Q96GM5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMARCD1Q96GM5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
SMARCD1Q96GM5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 AC124016.1-201ENST00000609552 612 ntBASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.01■□□□□ 0.95
SMARCD1Q96GM5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21■□□□□ 0.95
SMARCD1Q96GM5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMARCD1Q96GM5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCD1Q96GM5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCD1Q96GM5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCD1Q96GM5 AC133681.1-201ENST00000465482 601 ntBASIC21■□□□□ 0.95
SMARCD1Q96GM5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
SMARCD1Q96GM5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21■□□□□ 0.95
SMARCD1Q96GM5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms