Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPB3Q92617 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPB3Q92617 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NPIPB3Q92617 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.74■□□□□ 0.11
NPIPB3Q92617 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPB3Q92617 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPB3Q92617 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPB3Q92617 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPB3Q92617 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NPIPB3Q92617 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.74■□□□□ 0.11
NPIPB3Q92617 MYCNOS-205ENST00000641950 531 ntBASIC15.74■□□□□ 0.11
NPIPB3Q92617 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPB3Q92617 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPB3Q92617 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPB3Q92617 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPB3Q92617 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.74■□□□□ 0.11
NPIPB3Q92617 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NPIPB3Q92617 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.74■□□□□ 0.11
NPIPB3Q92617 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPB3Q92617 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NPIPB3Q92617 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB3Q92617 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB3Q92617 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB3Q92617 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB3Q92617 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB3Q92617 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB3Q92617 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB3Q92617 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB3Q92617 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 AL591742.1-201ENST00000604433 565 ntBASIC15.73■□□□□ 0.11
NPIPB3Q92617 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 AC087633.2-202ENST00000565166 1439 ntBASIC15.73■□□□□ 0.11
NPIPB3Q92617 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB3Q92617 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB3Q92617 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB3Q92617 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB3Q92617 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB3Q92617 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB3Q92617 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPB3Q92617 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.73■□□□□ 0.11
NPIPB3Q92617 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
NPIPB3Q92617 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPB3Q92617 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NPIPB3Q92617 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NPIPB3Q92617 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
NPIPB3Q92617 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPB3Q92617 ZNRF2P3-201ENST00000424200 374 ntBASIC15.72■□□□□ 0.11
NPIPB3Q92617 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPB3Q92617 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.72■□□□□ 0.11
NPIPB3Q92617 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 KRT18P61-201ENST00000585825 1298 ntBASIC15.72■□□□□ 0.11
NPIPB3Q92617 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
NPIPB3Q92617 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPB3Q92617 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPB3Q92617 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPB3Q92617 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB3Q92617 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPIPB3Q92617 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB3Q92617 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
NPIPB3Q92617 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPB3Q92617 RNF165-205ENST00000588679 2904 ntBASIC15.71■□□□□ 0.11
NPIPB3Q92617 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPB3Q92617 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms