Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP1Q8TDR0 BX119927.1-201ENST00000636596 1552 ntBASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 AL355472.2-201ENST00000422958 438 ntBASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 AC092437.1-201ENST00000624794 1048 ntBASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAF3IP1Q8TDR0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 AC010980.2-201ENST00000587099 1412 ntBASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 AL589743.5-201ENST00000616611 1050 ntBASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP1Q8TDR0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 AC073111.5-205ENST00000641717 521 ntBASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF3IP1Q8TDR0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF3IP1Q8TDR0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAF3IP1Q8TDR0 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.77■□□□□ 0.91
TRAF3IP1Q8TDR0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 AL512625.2-201ENST00000417533 625 ntBASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 AC093787.1-201ENST00000450396 207 ntBASIC20.76■□□□□ 0.91
TRAF3IP1Q8TDR0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms