Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CLDND2Q8NHS1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDND2Q8NHS1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDND2Q8NHS1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CLDND2Q8NHS1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDND2Q8NHS1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDND2Q8NHS1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.96■□□□□ 0.31
CLDND2Q8NHS1 AC233263.1-201ENST00000578059 224 ntBASIC16.96■□□□□ 0.31
CLDND2Q8NHS1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDND2Q8NHS1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDND2Q8NHS1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDND2Q8NHS1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDND2Q8NHS1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.96■□□□□ 0.3
CLDND2Q8NHS1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.96■□□□□ 0.3
CLDND2Q8NHS1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CLDND2Q8NHS1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 AC069544.1-201ENST00000609399 999 ntBASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 FAM197Y4-202ENST00000622692 608 ntBASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLDND2Q8NHS1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 UBE2SP1-201ENST00000450587 669 ntBASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 RPS2P4-201ENST00000476944 856 ntBASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 RPPH1-201ENST00000516869 333 ntBASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 AC011484.1-201ENST00000377652 1995 ntBASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDND2Q8NHS1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 POM121L13P-201ENST00000422362 380 ntBASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 RN7SL471P-201ENST00000580476 299 ntBASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDND2Q8NHS1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLDND2Q8NHS1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms