Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 AL023875.1-201ENST00000640777 796 ntBASIC21.5■■□□□ 1.03
BEST2Q8NFU1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 AC239809.2-201ENST00000415381 517 ntBASIC21.49■■□□□ 1.03
BEST2Q8NFU1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 UBE2SP1-201ENST00000450587 669 ntBASIC21.49■■□□□ 1.03
BEST2Q8NFU1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
BEST2Q8NFU1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 AP005212.1-201ENST00000581547 1997 ntBASIC21.48■■□□□ 1.03
BEST2Q8NFU1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
BEST2Q8NFU1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 FEM1AP1-201ENST00000431297 1995 ntBASIC21.47■■□□□ 1.03
BEST2Q8NFU1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
BEST2Q8NFU1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.46■■□□□ 1.03
BEST2Q8NFU1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms