Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 C2orf69P4-201ENST00000565394 541 ntBASIC6.15□□□□□ -1.43
SYNE1Q8NF91 SNX21-213ENST00000614929 587 ntTSL 5 BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
SYNE1Q8NF91 KRT17P3-201ENST00000420566 1262 ntBASIC6.14□□□□□ -1.43
SYNE1Q8NF91 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 AC026310.3-201ENST00000625186 2373 ntBASIC6.14□□□□□ -1.43
SYNE1Q8NF91 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 TK2-204ENST00000525974 1178 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 PRKY-204ENST00000533551 1019 ntBASIC6.14□□□□□ -1.43
SYNE1Q8NF91 MTDHP1-201ENST00000605323 784 ntBASIC6.14□□□□□ -1.43
SYNE1Q8NF91 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 REXO2-208ENST00000539754 791 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 AC092368.3-202ENST00000574180 1591 ntBASIC6.14□□□□□ -1.43
SYNE1Q8NF91 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 FAM197Y4-202ENST00000622692 608 ntBASIC6.14□□□□□ -1.43
SYNE1Q8NF91 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 EXOC3-AS1-202ENST00000623673 1663 ntBASIC6.14□□□□□ -1.43
SYNE1Q8NF91 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SYNE1Q8NF91 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms