Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 FAM197Y1-201ENST00000421178 764 ntBASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 AL121829.2-201ENST00000620908 328 ntBASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ZNF248Q8NDW4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 UNC93B2-201ENST00000285383 730 ntBASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 AC113347.1-201ENST00000413321 391 ntBASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 AC073195.1-201ENST00000607241 877 ntBASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 AL356652.1-201ENST00000615962 565 ntBASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 AC026471.6-201ENST00000622954 1905 ntBASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.11■□□□□ 0.65
ZNF248Q8NDW4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ZNF248Q8NDW4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 RBM17P1-201ENST00000453646 1190 ntBASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF248Q8NDW4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF248Q8NDW4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF248Q8NDW4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF248Q8NDW4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF248Q8NDW4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF248Q8NDW4 LINC01568-207ENST00000641790 1380 ntBASIC19.08■□□□□ 0.65
ZNF248Q8NDW4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.08■□□□□ 0.65
ZNF248Q8NDW4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF248Q8NDW4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF248Q8NDW4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms