Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 AP002414.4-201ENST00000589764 1148 ntBASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 BX842568.4-201ENST00000421222 227 ntBASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 AC068473.5-201ENST00000616428 2072 ntBASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 ANOS2P-203ENST00000472227 1816 ntBASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 AL512604.3-201ENST00000569583 964 ntBASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 ABR-217ENST00000572441 563 ntTSL 4 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 HLA-A-201ENST00000376802 1334 ntBASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 C1QL1P1-201ENST00000568105 661 ntBASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 AL023803.3-201ENST00000615559 522 ntBASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 AL031432.5-201ENST00000641059 760 ntBASIC11.28□□□□□ -0.6
HMCN2Q8NDA2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HMCN2Q8NDA2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HMCN2Q8NDA2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
HMCN2Q8NDA2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
HMCN2Q8NDA2 AL645929.1-201ENST00000420084 975 ntBASIC11.27□□□□□ -0.6
HMCN2Q8NDA2 AC005104.2-201ENST00000427818 678 ntBASIC11.27□□□□□ -0.6
HMCN2Q8NDA2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC11.27□□□□□ -0.6
HMCN2Q8NDA2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC11.27□□□□□ -0.6
HMCN2Q8NDA2 AC055717.3-201ENST00000622967 595 ntBASIC11.27□□□□□ -0.6
HMCN2Q8NDA2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HMCN2Q8NDA2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 AC023632.3-201ENST00000521633 145 ntBASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 AC091304.2-201ENST00000564639 760 ntBASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 AL139424.1-201ENST00000607572 797 ntBASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 AKR1C7P-201ENST00000305623 895 ntBASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 KRT18P31-201ENST00000506277 1292 ntBASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 ZNF444P1-201ENST00000559497 298 ntBASIC11.27□□□□□ -0.61
HMCN2Q8NDA2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HMCN2Q8NDA2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms