Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
PHTF2Q8N3S3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.67■□□□□ 0.9
PHTF2Q8N3S3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.67■□□□□ 0.9
PHTF2Q8N3S3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.67■□□□□ 0.9
PHTF2Q8N3S3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.67■□□□□ 0.9
PHTF2Q8N3S3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PHTF2Q8N3S3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHTF2Q8N3S3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHTF2Q8N3S3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHTF2Q8N3S3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PHTF2Q8N3S3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PHTF2Q8N3S3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PHTF2Q8N3S3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHTF2Q8N3S3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 SNORA78-201ENST00000459373 127 ntBASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHTF2Q8N3S3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 AC239809.2-201ENST00000415381 517 ntBASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 AC012618.2-201ENST00000428058 849 ntBASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 AC233702.5-201ENST00000584107 538 ntBASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PHTF2Q8N3S3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHTF2Q8N3S3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.64■□□□□ 0.9
PHTF2Q8N3S3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PHTF2Q8N3S3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHTF2Q8N3S3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHTF2Q8N3S3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
PHTF2Q8N3S3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHTF2Q8N3S3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 AL049796.1-201ENST00000565336 1766 ntBASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHTF2Q8N3S3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 RPS2P55-201ENST00000397318 883 ntBASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 AC107956.1-201ENST00000494359 873 ntBASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.63■□□□□ 0.89
PHTF2Q8N3S3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms