Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMC5Q8IY18 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMC5Q8IY18 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SMC5Q8IY18 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC24.78■■□□□ 1.56
SMC5Q8IY18 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMC5Q8IY18 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.78■■□□□ 1.56
SMC5Q8IY18 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMC5Q8IY18 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMC5Q8IY18 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMC5Q8IY18 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SMC5Q8IY18 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
SMC5Q8IY18 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SMC5Q8IY18 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC24.77■■□□□ 1.56
SMC5Q8IY18 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC24.77■■□□□ 1.56
SMC5Q8IY18 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SMC5Q8IY18 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC24.77■■□□□ 1.56
SMC5Q8IY18 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SMC5Q8IY18 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SMC5Q8IY18 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SMC5Q8IY18 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
SMC5Q8IY18 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SMC5Q8IY18 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SMC5Q8IY18 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SMC5Q8IY18 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC24.76■■□□□ 1.55
SMC5Q8IY18 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC24.76■■□□□ 1.55
SMC5Q8IY18 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
SMC5Q8IY18 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
SMC5Q8IY18 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMC5Q8IY18 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMC5Q8IY18 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SMC5Q8IY18 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.76■■□□□ 1.55
SMC5Q8IY18 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SMC5Q8IY18 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SMC5Q8IY18 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMC5Q8IY18 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SMC5Q8IY18 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC24.76■■□□□ 1.55
SMC5Q8IY18 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMC5Q8IY18 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC24.75■■□□□ 1.55
SMC5Q8IY18 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SMC5Q8IY18 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SMC5Q8IY18 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
SMC5Q8IY18 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
SMC5Q8IY18 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
SMC5Q8IY18 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC24.75■■□□□ 1.55
SMC5Q8IY18 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SMC5Q8IY18 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC24.75■■□□□ 1.55
SMC5Q8IY18 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.75■■□□□ 1.55
SMC5Q8IY18 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.75■■□□□ 1.55
SMC5Q8IY18 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
SMC5Q8IY18 NXN-202ENST00000537628 1340 ntTSL 3 BASIC24.75■■□□□ 1.55
SMC5Q8IY18 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SMC5Q8IY18 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SMC5Q8IY18 PWWP2AP1-201ENST00000429776 2273 ntBASIC24.75■■□□□ 1.55
SMC5Q8IY18 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
SMC5Q8IY18 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SMC5Q8IY18 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SMC5Q8IY18 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24.75■■□□□ 1.55
SMC5Q8IY18 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
SMC5Q8IY18 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC24.74■■□□□ 1.55
SMC5Q8IY18 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
SMC5Q8IY18 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SMC5Q8IY18 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SMC5Q8IY18 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SMC5Q8IY18 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.74■■□□□ 1.55
SMC5Q8IY18 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.74■■□□□ 1.55
SMC5Q8IY18 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.74■■□□□ 1.55
SMC5Q8IY18 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SMC5Q8IY18 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SMC5Q8IY18 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SMC5Q8IY18 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC24.74■■□□□ 1.55
SMC5Q8IY18 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC24.74■■□□□ 1.55
SMC5Q8IY18 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SMC5Q8IY18 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC24.74■■□□□ 1.55
SMC5Q8IY18 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SMC5Q8IY18 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC24.74■■□□□ 1.55
SMC5Q8IY18 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
SMC5Q8IY18 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SMC5Q8IY18 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SMC5Q8IY18 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
SMC5Q8IY18 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SMC5Q8IY18 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
SMC5Q8IY18 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SMC5Q8IY18 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SMC5Q8IY18 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.73■■□□□ 1.55
SMC5Q8IY18 CROCCP5-201ENST00000436658 830 ntBASIC24.73■■□□□ 1.55
SMC5Q8IY18 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SMC5Q8IY18 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
SMC5Q8IY18 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
SMC5Q8IY18 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SMC5Q8IY18 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SMC5Q8IY18 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SMC5Q8IY18 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC24.73■■□□□ 1.55
SMC5Q8IY18 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC24.72■■□□□ 1.55
SMC5Q8IY18 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SMC5Q8IY18 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SMC5Q8IY18 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
SMC5Q8IY18 AP001271.2-201ENST00000624018 1556 ntBASIC24.72■■□□□ 1.55
SMC5Q8IY18 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SMC5Q8IY18 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SMC5Q8IY18 HLA-G-202ENST00000376815 851 ntBASIC24.72■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms