Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.94■□□□□ 0.78
LDB1Q86U70 GUSBP6-202ENST00000438529 1198 ntBASIC19.94■□□□□ 0.78
LDB1Q86U70 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.94■□□□□ 0.78
LDB1Q86U70 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.94■□□□□ 0.78
LDB1Q86U70 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LDB1Q86U70 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.94■□□□□ 0.78
LDB1Q86U70 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LDB1Q86U70 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LDB1Q86U70 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LDB1Q86U70 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.94■□□□□ 0.78
LDB1Q86U70 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
LDB1Q86U70 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LDB1Q86U70 AC125437.2-201ENST00000625180 2167 ntBASIC19.94■□□□□ 0.78
LDB1Q86U70 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LDB1Q86U70 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LDB1Q86U70 KRT8P17-201ENST00000453110 1448 ntBASIC19.93■□□□□ 0.78
LDB1Q86U70 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LDB1Q86U70 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LDB1Q86U70 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.93■□□□□ 0.78
LDB1Q86U70 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.93■□□□□ 0.78
LDB1Q86U70 NCF1B-203ENST00000435988 1254 ntBASIC19.93■□□□□ 0.78
LDB1Q86U70 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.93■□□□□ 0.78
LDB1Q86U70 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.93■□□□□ 0.78
LDB1Q86U70 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.93■□□□□ 0.78
LDB1Q86U70 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.93■□□□□ 0.78
LDB1Q86U70 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.93■□□□□ 0.78
LDB1Q86U70 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LDB1Q86U70 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LDB1Q86U70 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LDB1Q86U70 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.93■□□□□ 0.78
LDB1Q86U70 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LDB1Q86U70 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.93■□□□□ 0.78
LDB1Q86U70 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LDB1Q86U70 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LDB1Q86U70 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LDB1Q86U70 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
LDB1Q86U70 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.92■□□□□ 0.78
LDB1Q86U70 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LDB1Q86U70 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LDB1Q86U70 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LDB1Q86U70 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LDB1Q86U70 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LDB1Q86U70 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.92■□□□□ 0.78
LDB1Q86U70 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LDB1Q86U70 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LDB1Q86U70 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.92■□□□□ 0.78
LDB1Q86U70 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LDB1Q86U70 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LDB1Q86U70 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.92■□□□□ 0.78
LDB1Q86U70 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.92■□□□□ 0.78
LDB1Q86U70 GPX1P1-201ENST00000388829 606 ntBASIC19.92■□□□□ 0.78
LDB1Q86U70 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.92■□□□□ 0.78
LDB1Q86U70 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LDB1Q86U70 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.92■□□□□ 0.78
LDB1Q86U70 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.92■□□□□ 0.78
LDB1Q86U70 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.92■□□□□ 0.78
LDB1Q86U70 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
LDB1Q86U70 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LDB1Q86U70 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.92■□□□□ 0.78
LDB1Q86U70 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LDB1Q86U70 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.92■□□□□ 0.78
LDB1Q86U70 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LDB1Q86U70 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LDB1Q86U70 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LDB1Q86U70 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.91■□□□□ 0.78
LDB1Q86U70 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.91■□□□□ 0.78
LDB1Q86U70 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
LDB1Q86U70 TSPY6P-201ENST00000448518 926 ntBASIC19.91■□□□□ 0.78
LDB1Q86U70 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.91■□□□□ 0.78
LDB1Q86U70 AC090192.1-201ENST00000517740 490 ntBASIC19.91■□□□□ 0.78
LDB1Q86U70 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LDB1Q86U70 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.91■□□□□ 0.78
LDB1Q86U70 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.91■□□□□ 0.78
LDB1Q86U70 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LDB1Q86U70 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LDB1Q86U70 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDB1Q86U70 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LDB1Q86U70 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDB1Q86U70 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDB1Q86U70 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LDB1Q86U70 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB1Q86U70 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDB1Q86U70 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LDB1Q86U70 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LDB1Q86U70 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms