Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 AC005829.2-201ENST00000571422 1056 ntBASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 AC009237.14-201ENST00000609975 1594 ntBASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.22■□□□□ 0.35
COLCA1Q6ZS62 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
COLCA1Q6ZS62 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COLCA1Q6ZS62 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COLCA1Q6ZS62 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.22■□□□□ 0.35
COLCA1Q6ZS62 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.22■□□□□ 0.35
COLCA1Q6ZS62 AC133041.1-202ENST00000642053 222 ntBASIC17.22■□□□□ 0.35
COLCA1Q6ZS62 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COLCA1Q6ZS62 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.22■□□□□ 0.35
COLCA1Q6ZS62 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
COLCA1Q6ZS62 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COLCA1Q6ZS62 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.22■□□□□ 0.35
COLCA1Q6ZS62 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COLCA1Q6ZS62 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COLCA1Q6ZS62 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COLCA1Q6ZS62 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 AC069152.1-201ENST00000438030 544 ntBASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 AC098934.4-201ENST00000564127 592 ntBASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 HLA-B-256ENST00000639848 1089 ntBASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 PCDHAC2-203ENST00000615316 3011 ntBASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COLCA1Q6ZS62 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
COLCA1Q6ZS62 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
COLCA1Q6ZS62 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 AC083880.1-201ENST00000608266 535 ntBASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.2■□□□□ 0.34
COLCA1Q6ZS62 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA1Q6ZS62 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms