Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 AC104187.1-201ENST00000607510 612 ntBASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.75■□□□□ 0.91
FOXR1Q6PIV2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.74■□□□□ 0.91
FOXR1Q6PIV2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 CD99P1-205ENST00000527459 561 ntBASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 MFSD11-216ENST00000590393 1141 ntBASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXR1Q6PIV2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXR1Q6PIV2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXR1Q6PIV2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXR1Q6PIV2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXR1Q6PIV2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
FOXR1Q6PIV2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.72■□□□□ 0.91
FOXR1Q6PIV2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.72■□□□□ 0.91
FOXR1Q6PIV2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXR1Q6PIV2 TMEM191A-211ENST00000637163 1067 ntBASIC20.72■□□□□ 0.91
FOXR1Q6PIV2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXR1Q6PIV2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXR1Q6PIV2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
FOXR1Q6PIV2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXR1Q6PIV2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXR1Q6PIV2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.71■□□□□ 0.91
FOXR1Q6PIV2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
FOXR1Q6PIV2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
FOXR1Q6PIV2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXR1Q6PIV2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FOXR1Q6PIV2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.7■□□□□ 0.9
FOXR1Q6PIV2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXR1Q6PIV2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms