Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF17Q5VTA0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.05■□□□□ 0.64
PRAMEF17Q5VTA0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.04■□□□□ 0.64
PRAMEF17Q5VTA0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.04■□□□□ 0.64
PRAMEF17Q5VTA0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF17Q5VTA0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF17Q5VTA0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF17Q5VTA0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF17Q5VTA0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF17Q5VTA0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PRAMEF17Q5VTA0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF17Q5VTA0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PRAMEF17Q5VTA0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.04■□□□□ 0.64
PRAMEF17Q5VTA0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF17Q5VTA0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.04■□□□□ 0.64
PRAMEF17Q5VTA0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF17Q5VTA0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF17Q5VTA0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEF17Q5VTA0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEF17Q5VTA0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PRAMEF17Q5VTA0 DPP3P2-201ENST00000416030 1696 ntBASIC19.02■□□□□ 0.64
PRAMEF17Q5VTA0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.02■□□□□ 0.64
PRAMEF17Q5VTA0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.02■□□□□ 0.64
PRAMEF17Q5VTA0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
PRAMEF17Q5VTA0 AC133681.1-201ENST00000465482 601 ntBASIC19.02■□□□□ 0.64
PRAMEF17Q5VTA0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.02■□□□□ 0.64
PRAMEF17Q5VTA0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.02■□□□□ 0.64
PRAMEF17Q5VTA0 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.02■□□□□ 0.64
PRAMEF17Q5VTA0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
PRAMEF17Q5VTA0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.02■□□□□ 0.64
PRAMEF17Q5VTA0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRAMEF17Q5VTA0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.02■□□□□ 0.63
PRAMEF17Q5VTA0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRAMEF17Q5VTA0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
PRAMEF17Q5VTA0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.02■□□□□ 0.63
PRAMEF17Q5VTA0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 SNORA78-201ENST00000459373 127 ntBASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRAMEF17Q5VTA0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms