Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.3■□□□□ 0.36
ATPAF1Q5TC12 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATPAF1Q5TC12 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATPAF1Q5TC12 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATPAF1Q5TC12 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATPAF1Q5TC12 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.29■□□□□ 0.36
ATPAF1Q5TC12 AL591742.1-201ENST00000604433 565 ntBASIC17.29■□□□□ 0.36
ATPAF1Q5TC12 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATPAF1Q5TC12 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.29■□□□□ 0.36
ATPAF1Q5TC12 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATPAF1Q5TC12 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATPAF1Q5TC12 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATPAF1Q5TC12 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 CNN2P6-201ENST00000439038 900 ntBASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.28■□□□□ 0.36
ATPAF1Q5TC12 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.27■□□□□ 0.36
ATPAF1Q5TC12 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATPAF1Q5TC12 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.27■□□□□ 0.36
ATPAF1Q5TC12 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.27■□□□□ 0.36
ATPAF1Q5TC12 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
ATPAF1Q5TC12 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.27■□□□□ 0.36
ATPAF1Q5TC12 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATPAF1Q5TC12 AC007322.1-201ENST00000426983 750 ntBASIC17.27■□□□□ 0.36
ATPAF1Q5TC12 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.27■□□□□ 0.36
ATPAF1Q5TC12 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.27■□□□□ 0.36
ATPAF1Q5TC12 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATPAF1Q5TC12 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATPAF1Q5TC12 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.27■□□□□ 0.36
ATPAF1Q5TC12 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.27■□□□□ 0.36
ATPAF1Q5TC12 AC116050.2-201ENST00000612102 1779 ntBASIC17.27■□□□□ 0.35
ATPAF1Q5TC12 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ATPAF1Q5TC12 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ATPAF1Q5TC12 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.27■□□□□ 0.35
ATPAF1Q5TC12 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.27■□□□□ 0.35
ATPAF1Q5TC12 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.27■□□□□ 0.35
ATPAF1Q5TC12 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.27■□□□□ 0.35
ATPAF1Q5TC12 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.27■□□□□ 0.35
ATPAF1Q5TC12 AP000974.1-201ENST00000623909 2387 ntBASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 AC125437.2-201ENST00000625180 2167 ntBASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 AC011484.1-201ENST00000377652 1995 ntBASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 CDV3P1-201ENST00000471403 739 ntBASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 AC073111.5-205ENST00000641717 521 ntBASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ATPAF1Q5TC12 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 CDCA4P2-201ENST00000441182 718 ntBASIC17.25■□□□□ 0.35
ATPAF1Q5TC12 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms