Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TMEM35AQ53FP2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 AC005829.2-201ENST00000571422 1056 ntBASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
TMEM35AQ53FP2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TMEM35AQ53FP2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM35AQ53FP2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19■□□□□ 0.63
TMEM35AQ53FP2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TMEM35AQ53FP2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19■□□□□ 0.63
TMEM35AQ53FP2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM35AQ53FP2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM35AQ53FP2 AC098934.4-201ENST00000564127 592 ntBASIC19■□□□□ 0.63
TMEM35AQ53FP2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19■□□□□ 0.63
TMEM35AQ53FP2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19■□□□□ 0.63
TMEM35AQ53FP2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM35AQ53FP2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TMEM35AQ53FP2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19■□□□□ 0.63
TMEM35AQ53FP2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
TMEM35AQ53FP2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM35AQ53FP2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19■□□□□ 0.63
TMEM35AQ53FP2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 AL355802.2-201ENST00000402069 882 ntBASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 AC083880.1-201ENST00000608266 535 ntBASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 AL691432.2-201ENST00000607222 2038 ntBASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM35AQ53FP2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 AC060766.5-201ENST00000590539 871 ntBASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 AC112907.3-201ENST00000577781 2400 ntBASIC18.98■□□□□ 0.63
TMEM35AQ53FP2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM35AQ53FP2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM35AQ53FP2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM35AQ53FP2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms