Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AL121829.2-201ENST00000620908 328 ntBASIC22.98■■□□□ 1.27
USH1GQ495M9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.98■■□□□ 1.27
USH1GQ495M9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
USH1GQ495M9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
USH1GQ495M9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.98■■□□□ 1.27
USH1GQ495M9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
USH1GQ495M9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
USH1GQ495M9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
USH1GQ495M9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
USH1GQ495M9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
USH1GQ495M9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
USH1GQ495M9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
USH1GQ495M9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
USH1GQ495M9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
USH1GQ495M9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
USH1GQ495M9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
USH1GQ495M9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.97■■□□□ 1.27
USH1GQ495M9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.97■■□□□ 1.27
USH1GQ495M9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
USH1GQ495M9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
USH1GQ495M9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.97■■□□□ 1.27
USH1GQ495M9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
USH1GQ495M9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
USH1GQ495M9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
USH1GQ495M9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
USH1GQ495M9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.97■■□□□ 1.27
USH1GQ495M9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.97■■□□□ 1.27
USH1GQ495M9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.96■■□□□ 1.27
USH1GQ495M9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
USH1GQ495M9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
USH1GQ495M9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
USH1GQ495M9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
USH1GQ495M9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
USH1GQ495M9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.96■■□□□ 1.27
USH1GQ495M9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
USH1GQ495M9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.96■■□□□ 1.27
USH1GQ495M9 AL121906.2-201ENST00000621597 723 ntBASIC22.96■■□□□ 1.27
USH1GQ495M9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.96■■□□□ 1.27
USH1GQ495M9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
USH1GQ495M9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
USH1GQ495M9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
USH1GQ495M9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
USH1GQ495M9 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.96■■□□□ 1.27
USH1GQ495M9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
USH1GQ495M9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.27
USH1GQ495M9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.95■■□□□ 1.27
USH1GQ495M9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
USH1GQ495M9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
USH1GQ495M9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
USH1GQ495M9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
USH1GQ495M9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
USH1GQ495M9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.95■■□□□ 1.26
USH1GQ495M9 MIR718-201ENST00000390190 70 ntBASIC22.95■■□□□ 1.26
USH1GQ495M9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.95■■□□□ 1.26
USH1GQ495M9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
USH1GQ495M9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.95■■□□□ 1.26
USH1GQ495M9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.95■■□□□ 1.26
USH1GQ495M9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
USH1GQ495M9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
USH1GQ495M9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
USH1GQ495M9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.95■■□□□ 1.26
USH1GQ495M9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
USH1GQ495M9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
USH1GQ495M9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
USH1GQ495M9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
USH1GQ495M9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
USH1GQ495M9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
USH1GQ495M9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
USH1GQ495M9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
USH1GQ495M9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
USH1GQ495M9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
USH1GQ495M9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
USH1GQ495M9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.94■■□□□ 1.26
USH1GQ495M9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
USH1GQ495M9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.94■■□□□ 1.26
USH1GQ495M9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.94■■□□□ 1.26
USH1GQ495M9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
USH1GQ495M9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
USH1GQ495M9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
USH1GQ495M9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
USH1GQ495M9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
USH1GQ495M9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
USH1GQ495M9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
USH1GQ495M9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
USH1GQ495M9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.93■■□□□ 1.26
USH1GQ495M9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.93■■□□□ 1.26
USH1GQ495M9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.93■■□□□ 1.26
USH1GQ495M9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
USH1GQ495M9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
USH1GQ495M9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
USH1GQ495M9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC22.93■■□□□ 1.26
USH1GQ495M9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
USH1GQ495M9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.93■■□□□ 1.26
USH1GQ495M9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.93■■□□□ 1.26
USH1GQ495M9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.92■■□□□ 1.26
USH1GQ495M9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
USH1GQ495M9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
USH1GQ495M9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
USH1GQ495M9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.92■■□□□ 1.26
USH1GQ495M9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms