Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 FAM210CP-201ENST00000445714 574 ntBASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 LINC01023-201ENST00000606054 436 ntBASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SHROOM1Q2M3G4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
SHROOM1Q2M3G4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.42■■□□□ 1.34
SHROOM1Q2M3G4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SHROOM1Q2M3G4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SHROOM1Q2M3G4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
SHROOM1Q2M3G4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.42■■□□□ 1.34
SHROOM1Q2M3G4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.42■■□□□ 1.34
SHROOM1Q2M3G4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SHROOM1Q2M3G4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.42■■□□□ 1.34
SHROOM1Q2M3G4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SHROOM1Q2M3G4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SHROOM1Q2M3G4 KRT8P17-201ENST00000453110 1448 ntBASIC23.42■■□□□ 1.34
SHROOM1Q2M3G4 KRT8P9-201ENST00000558927 1449 ntBASIC23.42■■□□□ 1.34
SHROOM1Q2M3G4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 AC079834.2-201ENST00000609776 1949 ntBASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 AC012306.2-201ENST00000609350 630 ntBASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SHROOM1Q2M3G4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 HLA-G-202ENST00000376815 851 ntBASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 HLA-G-203ENST00000376818 1127 ntBASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SHROOM1Q2M3G4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.39■■□□□ 1.34
SHROOM1Q2M3G4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SHROOM1Q2M3G4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SHROOM1Q2M3G4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
SHROOM1Q2M3G4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SHROOM1Q2M3G4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SHROOM1Q2M3G4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SHROOM1Q2M3G4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.39■■□□□ 1.33
SHROOM1Q2M3G4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SHROOM1Q2M3G4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.39■■□□□ 1.33
SHROOM1Q2M3G4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SHROOM1Q2M3G4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms