Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ODF4Q2M2E3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ODF4Q2M2E3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ODF4Q2M2E3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
ODF4Q2M2E3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 FAM21FP-204ENST00000608637 956 ntBASIC17.64■□□□□ 0.41
ODF4Q2M2E3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 AC019069.1-201ENST00000610008 1333 ntBASIC17.64■□□□□ 0.41
ODF4Q2M2E3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ODF4Q2M2E3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 UBE2DNL-204ENST00000602536 740 ntBASIC17.63■□□□□ 0.41
ODF4Q2M2E3 AC243732.1-201ENST00000612648 864 ntBASIC17.63■□□□□ 0.41
ODF4Q2M2E3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ODF4Q2M2E3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ODF4Q2M2E3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 CDV3P1-201ENST00000471403 739 ntBASIC17.61■□□□□ 0.41
ODF4Q2M2E3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ODF4Q2M2E3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms