Protein–RNA interactions for Protein: Q03880

PKR1, V-type ATPase assembly factor PKR1, yeastyeast

Known RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PKR1Q03880 YIL002W-AYIL002W-A 210 nt-1.13□□□□□ -2.59
PKR1Q03880 YFL063WYFL063W 456 nt-1.14□□□□□ -2.59
PKR1Q03880 snR36snR36 182 nt-1.14□□□□□ -2.59
PKR1Q03880 YHL009W-BYHL009W-B 5409 nt-1.15□□□□□ -2.59
PKR1Q03880 YER053C-AYER053C-A 114 nt-1.15□□□□□ -2.59
PKR1Q03880 BI2Q0110 1272 nt-1.15□□□□□ -2.59
PKR1Q03880 VPS20YMR077C 666 nt-1.16□□□□□ -2.6
PKR1Q03880 YKL123WYKL123W 381 nt-1.17□□□□□ -2.6
PKR1Q03880 YLR154W-FYLR154W-F 141 nt-1.17□□□□□ -2.6
PKR1Q03880 YJL182CYJL182C 318 nt-1.18□□□□□ -2.6
PKR1Q03880 CSN9YDR179C 489 nt-1.2□□□□□ -2.6
PKR1Q03880 snR161snR161 161 nt-1.2□□□□□ -2.6
PKR1Q03880 YDR544CYDR544C 429 nt-1.21□□□□□ -2.6
PKR1Q03880 RPS27BYHR021C 249 nt-1.22□□□□□ -2.6
PKR1Q03880 APQ12YIL040W 417 nt-1.22□□□□□ -2.6
PKR1Q03880 YMR193C-AYMR193C-A 387 nt-1.22□□□□□ -2.6
PKR1Q03880 snR49snR49 165 nt-1.22□□□□□ -2.6
PKR1Q03880 YER006C-AYER006C-A 318 nt-1.23□□□□□ -2.61
PKR1Q03880 YGR069WYGR069W 336 nt-1.23□□□□□ -2.61
PKR1Q03880 STE18YJR086W 333 nt-1.23□□□□□ -2.61
PKR1Q03880 YGL052WYGL052W 306 nt-1.25□□□□□ -2.61
PKR1Q03880 YLL019W-AYLL019W-A 93 nt-1.25□□□□□ -2.61
PKR1Q03880 YOR170WYOR170W 306 nt-1.25□□□□□ -2.61
PKR1Q03880 YGL182CYGL182C 324 nt-1.28□□□□□ -2.61
PKR1Q03880 YIL115W-AYIL115W-A 372 nt-1.28□□□□□ -2.61
PKR1Q03880 YPR010C-AYPR010C-A 219 nt-1.28□□□□□ -2.61
PKR1Q03880 tP(UGG)QtP(UGG)Q 72 nt-1.29□□□□□ -2.62
PKR1Q03880 TOM22YNL131W 459 nt-1.29□□□□□ -2.62
PKR1Q03880 CSE2YNR010W 450 nt-1.29□□□□□ -2.62
PKR1Q03880 YJL197C-AYJL197C-A 282 nt-1.33□□□□□ -2.62
PKR1Q03880 YNL122CYNL122C 348 nt-1.34□□□□□ -2.62
PKR1Q03880 snR41snR41 95 nt-1.35□□□□□ -2.63
PKR1Q03880 YCR038W-AYCR038W-A 126 nt-1.37□□□□□ -2.63
PKR1Q03880 TAH1YCR060W 336 nt-1.37□□□□□ -2.63
PKR1Q03880 YBR223W-AYBR223W-A 120 nt-1.37□□□□□ -2.63
PKR1Q03880 tQ(UUG)QtQ(UUG)Q 76 nt-1.38□□□□□ -2.63
PKR1Q03880 HMRA1YCR097W 381 nt-1.4□□□□□ -2.63
PKR1Q03880 YLR434CYLR434C 384 nt-1.41□□□□□ -2.64
PKR1Q03880 YAF9YNL107W 681 nt-1.41□□□□□ -2.64
PKR1Q03880 YJL077W-AYJL077W-A 87 nt-1.42□□□□□ -2.64
PKR1Q03880 YML099W-AYML099W-A 330 nt-1.43□□□□□ -2.64
PKR1Q03880 YPR016W-AYPR016W-A 261 nt-1.43□□□□□ -2.64
PKR1Q03880 snR74snR74 88 nt-1.44□□□□□ -2.64
PKR1Q03880 YOR015WYOR015W 360 nt-1.45□□□□□ -2.64
PKR1Q03880 YER137W-AYER137W-A 306 nt-1.46□□□□□ -2.64
PKR1Q03880 YDR048CYDR048C 315 nt-1.47□□□□□ -2.64
PKR1Q03880 JLP2YMR132C 627 nt-1.47□□□□□ -2.64
PKR1Q03880 YOR072W-BYOR072W-B 162 nt-1.48□□□□□ -2.65
PKR1Q03880 YOR314W-AYOR314W-A 111 nt-1.48□□□□□ -2.65
PKR1Q03880 snR50snR50 90 nt-1.5□□□□□ -2.65
PKR1Q03880 YIL032CYIL032C 357 nt-1.51□□□□□ -2.65
PKR1Q03880 YNL266WYNL266W 420 nt-1.51□□□□□ -2.65
PKR1Q03880 YGL149WYGL149W 306 nt-1.52□□□□□ -2.65
PKR1Q03880 YER090C-AYER090C-A 90 nt-1.53□□□□□ -2.65
PKR1Q03880 YBL039C-AYBL039C-A 84 nt-1.53□□□□□ -2.65
PKR1Q03880 SKI7YOR076C 2244 nt-1.54□□□□□ -2.66
PKR1Q03880 snR60snR60 104 nt-1.54□□□□□ -2.66
PKR1Q03880 snR189snR189 189 nt-1.54□□□□□ -2.66
PKR1Q03880 snR69snR69 101 nt-1.55□□□□□ -2.66
PKR1Q03880 YDL158CYDL158C 309 nt-1.55□□□□□ -2.66
PKR1Q03880 YNR025CYNR025C 360 nt-1.56□□□□□ -2.66
PKR1Q03880 tW(UCA)QtW(UCA)Q 74 nt-1.58□□□□□ -2.66
PKR1Q03880 YDR102CYDR102C 333 nt-1.62□□□□□ -2.67
PKR1Q03880 YOL013W-BYOL013W-B 291 nt-1.62□□□□□ -2.67
PKR1Q03880 YOR121CYOR121C 306 nt-1.62□□□□□ -2.67
PKR1Q03880 YLR406C-AYLR406C-A 150 nt-1.63□□□□□ -2.67
PKR1Q03880 YBR285WYBR285W 435 nt-1.65□□□□□ -2.67
PKR1Q03880 tY(GUA)QtY(GUA)Q 84 nt-1.66□□□□□ -2.68
PKR1Q03880 YMR001C-AYMR001C-A 231 nt-1.66□□□□□ -2.68
PKR1Q03880 RDS3YPR094W 324 nt-1.67□□□□□ -2.68
PKR1Q03880 tR(UCU)Q1tR(UCU)Q1 73 nt-1.68□□□□□ -2.68
PKR1Q03880 YNL324WYNL324W 396 nt-1.7□□□□□ -2.68
PKR1Q03880 YFL032WYFL032W 321 nt-1.71□□□□□ -2.68
PKR1Q03880 snR67snR67 82 nt-1.73□□□□□ -2.69
PKR1Q03880 YNL028WYNL028W 318 nt-1.73□□□□□ -2.69
PKR1Q03880 YNR077CYNR077C 255 nt-1.74□□□□□ -2.69
PKR1Q03880 ATP6Q0085 780 nt-1.75□□□□□ -2.69
PKR1Q03880 snR78snR78 87 nt-1.76□□□□□ -2.69
PKR1Q03880 PMP2YEL017C-A 132 nt-1.76□□□□□ -2.69
PKR1Q03880 YER097WYER097W 330 nt-1.76□□□□□ -2.69
PKR1Q03880 CDC65tQ(CUG)M 72 nt-1.76□□□□□ -2.69
PKR1Q03880 YLR202CYLR202C 327 nt-1.77□□□□□ -2.69
PKR1Q03880 YNL205CYNL205C 423 nt-1.78□□□□□ -2.69
PKR1Q03880 ATP19YOL077W-A 207 nt-1.78□□□□□ -2.69
PKR1Q03880 YFL019CYFL019C 354 nt-1.79□□□□□ -2.7
PKR1Q03880 YOR008C-AYOR008C-A 225 nt-1.79□□□□□ -2.7
PKR1Q03880 BIL1YOR304C-A 231 nt-1.8□□□□□ -2.7
PKR1Q03880 snR77snR77 88 nt-1.81□□□□□ -2.7
PKR1Q03880 tM(CAU)Q2tM(CAU)Q2 78 nt-1.81□□□□□ -2.7
PKR1Q03880 YLR120W-AYLR120W-A 102 nt-1.81□□□□□ -2.7
PKR1Q03880 YML054C-AYML054C-A 159 nt-1.81□□□□□ -2.7
PKR1Q03880 YGL041CYGL041C 204 nt-1.85□□□□□ -2.71
PKR1Q03880 YGR240C-AYGR240C-A 201 nt-1.85□□□□□ -2.71
PKR1Q03880 snR39BsnR39B 96 nt-1.85□□□□□ -2.71
PKR1Q03880 HTL1YCR020W-B 237 nt-1.86□□□□□ -2.71
PKR1Q03880 YKL063CYKL063C 504 nt-1.87□□□□□ -2.71
PKR1Q03880 snR81snR81 201 nt-1.88□□□□□ -2.71
PKR1Q03880 YGR146C-AYGR146C-A 162 nt-1.88□□□□□ -2.71
PKR1Q03880 YLR286W-AYLR286W-A 135 nt-1.88□□□□□ -2.71
PKR1Q03880 tD(GUC)QtD(GUC)Q 75 nt-1.89□□□□□ -2.71
Retrieved 100 of 7,029 protein–RNA pairs in 84.4 ms