Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.49■□□□□ 0.71
YBX1P67809 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.49■□□□□ 0.71
YBX1P67809 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
YBX1P67809 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
YBX1P67809 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.49■□□□□ 0.71
YBX1P67809 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
YBX1P67809 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.49■□□□□ 0.71
YBX1P67809 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
YBX1P67809 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.49■□□□□ 0.71
YBX1P67809 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
YBX1P67809 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
YBX1P67809 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
YBX1P67809 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
YBX1P67809 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.48■□□□□ 0.71
YBX1P67809 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
YBX1P67809 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
YBX1P67809 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
YBX1P67809 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.48■□□□□ 0.71
YBX1P67809 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.48■□□□□ 0.71
YBX1P67809 DPP3P2-201ENST00000416030 1696 ntBASIC19.48■□□□□ 0.71
YBX1P67809 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
YBX1P67809 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
YBX1P67809 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
YBX1P67809 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
YBX1P67809 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
YBX1P67809 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
YBX1P67809 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
YBX1P67809 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
YBX1P67809 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
YBX1P67809 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
YBX1P67809 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.47■□□□□ 0.71
YBX1P67809 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
YBX1P67809 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
YBX1P67809 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.47■□□□□ 0.71
YBX1P67809 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
YBX1P67809 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
YBX1P67809 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
YBX1P67809 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
YBX1P67809 AC097658.1-201ENST00000475555 843 ntBASIC19.47■□□□□ 0.71
YBX1P67809 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
YBX1P67809 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.47■□□□□ 0.71
YBX1P67809 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.47■□□□□ 0.71
YBX1P67809 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
YBX1P67809 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.47■□□□□ 0.71
YBX1P67809 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
YBX1P67809 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
YBX1P67809 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.47■□□□□ 0.71
YBX1P67809 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
YBX1P67809 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
YBX1P67809 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
YBX1P67809 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
YBX1P67809 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.46■□□□□ 0.71
YBX1P67809 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
YBX1P67809 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
YBX1P67809 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.46■□□□□ 0.71
YBX1P67809 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
YBX1P67809 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
YBX1P67809 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.46■□□□□ 0.71
YBX1P67809 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.46■□□□□ 0.71
YBX1P67809 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.46■□□□□ 0.71
YBX1P67809 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.46■□□□□ 0.71
YBX1P67809 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.46■□□□□ 0.71
YBX1P67809 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
YBX1P67809 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
YBX1P67809 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
YBX1P67809 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
YBX1P67809 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
YBX1P67809 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
YBX1P67809 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
YBX1P67809 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
YBX1P67809 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.45■□□□□ 0.7
YBX1P67809 PTBP1P-201ENST00000554374 1601 ntBASIC19.45■□□□□ 0.7
YBX1P67809 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
YBX1P67809 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
YBX1P67809 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
YBX1P67809 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.45■□□□□ 0.7
YBX1P67809 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.45■□□□□ 0.7
YBX1P67809 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.45■□□□□ 0.7
YBX1P67809 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
YBX1P67809 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
YBX1P67809 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
YBX1P67809 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.45■□□□□ 0.7
YBX1P67809 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.45■□□□□ 0.7
YBX1P67809 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
YBX1P67809 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms