Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 AL031963.3-201ENST00000606441 850 ntBASIC19■□□□□ 0.63
CLDN8P56748 AC105020.6-201ENST00000621523 1217 ntBASIC19■□□□□ 0.63
CLDN8P56748 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19■□□□□ 0.63
CLDN8P56748 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19■□□□□ 0.63
CLDN8P56748 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19■□□□□ 0.63
CLDN8P56748 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN8P56748 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19■□□□□ 0.63
CLDN8P56748 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLDN8P56748 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLDN8P56748 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN8P56748 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CLDN8P56748 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.99■□□□□ 0.63
CLDN8P56748 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN8P56748 AC016769.1-201ENST00000409132 1010 ntBASIC18.99■□□□□ 0.63
CLDN8P56748 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.99■□□□□ 0.63
CLDN8P56748 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.99■□□□□ 0.63
CLDN8P56748 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.99■□□□□ 0.63
CLDN8P56748 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.99■□□□□ 0.63
CLDN8P56748 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CLDN8P56748 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.99■□□□□ 0.63
CLDN8P56748 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.99■□□□□ 0.63
CLDN8P56748 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN8P56748 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
CLDN8P56748 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN8P56748 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN8P56748 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.99■□□□□ 0.63
CLDN8P56748 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CLDN8P56748 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN8P56748 KRT8P20-201ENST00000423953 1409 ntBASIC18.99■□□□□ 0.63
CLDN8P56748 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
CLDN8P56748 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN8P56748 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN8P56748 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN8P56748 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN8P56748 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.98■□□□□ 0.63
CLDN8P56748 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLDN8P56748 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CLDN8P56748 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN8P56748 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN8P56748 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.98■□□□□ 0.63
CLDN8P56748 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.98■□□□□ 0.63
CLDN8P56748 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.98■□□□□ 0.63
CLDN8P56748 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.98■□□□□ 0.63
CLDN8P56748 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN8P56748 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN8P56748 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN8P56748 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CLDN8P56748 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN8P56748 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN8P56748 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN8P56748 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CLDN8P56748 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CLDN8P56748 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN8P56748 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN8P56748 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN8P56748 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN8P56748 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN8P56748 AC005332.7-201ENST00000614046 2005 ntBASIC18.97■□□□□ 0.63
CLDN8P56748 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN8P56748 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN8P56748 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN8P56748 AC006015.1-201ENST00000429970 570 ntBASIC18.97■□□□□ 0.63
CLDN8P56748 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.97■□□□□ 0.63
CLDN8P56748 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN8P56748 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CLDN8P56748 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN8P56748 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CLDN8P56748 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN8P56748 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN8P56748 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN8P56748 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN8P56748 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN8P56748 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN8P56748 BX323043.1-201ENST00000641006 1765 ntBASIC18.96■□□□□ 0.63
CLDN8P56748 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN8P56748 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN8P56748 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CLDN8P56748 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN8P56748 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.96■□□□□ 0.63
CLDN8P56748 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CLDN8P56748 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN8P56748 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN8P56748 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.96■□□□□ 0.63
CLDN8P56748 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CLDN8P56748 CYP2T3P-201ENST00000601990 817 ntBASIC18.96■□□□□ 0.63
CLDN8P56748 AC011767.1-201ENST00000617410 1153 ntBASIC18.96■□□□□ 0.63
CLDN8P56748 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN8P56748 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLDN8P56748 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN8P56748 AC093484.2-201ENST00000580996 2166 ntBASIC18.96■□□□□ 0.63
CLDN8P56748 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLDN8P56748 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN8P56748 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN8P56748 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN8P56748 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLDN8P56748 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN8P56748 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.95■□□□□ 0.62
CLDN8P56748 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLDN8P56748 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN8P56748 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms