Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH11P55287 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH11P55287 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH11P55287 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH11P55287 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH11P55287 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH11P55287 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH11P55287 AC125437.2-201ENST00000625180 2167 ntBASIC18.25■□□□□ 0.51
CDH11P55287 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CDH11P55287 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH11P55287 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CDH11P55287 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH11P55287 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH11P55287 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.25■□□□□ 0.51
CDH11P55287 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.25■□□□□ 0.51
CDH11P55287 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.25■□□□□ 0.51
CDH11P55287 AC010536.3-201ENST00000620306 533 ntBASIC18.25■□□□□ 0.51
CDH11P55287 AC120498.10-201ENST00000621827 505 ntBASIC18.25■□□□□ 0.51
CDH11P55287 AL158211.5-201ENST00000623583 2518 ntBASIC18.25■□□□□ 0.51
CDH11P55287 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH11P55287 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH11P55287 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH11P55287 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH11P55287 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH11P55287 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH11P55287 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH11P55287 KRT16P2-201ENST00000414673 1423 ntBASIC18.24■□□□□ 0.51
CDH11P55287 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH11P55287 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH11P55287 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH11P55287 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
CDH11P55287 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH11P55287 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH11P55287 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH11P55287 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH11P55287 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH11P55287 AL121832.2-201ENST00000610979 668 ntBASIC18.24■□□□□ 0.51
CDH11P55287 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDH11P55287 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH11P55287 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH11P55287 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH11P55287 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.24■□□□□ 0.51
CDH11P55287 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH11P55287 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH11P55287 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH11P55287 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH11P55287 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH11P55287 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH11P55287 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CDH11P55287 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH11P55287 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH11P55287 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH11P55287 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH11P55287 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH11P55287 AC116050.2-201ENST00000612102 1779 ntBASIC18.23■□□□□ 0.51
CDH11P55287 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CDH11P55287 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH11P55287 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH11P55287 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH11P55287 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.23■□□□□ 0.51
CDH11P55287 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CDH11P55287 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH11P55287 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH11P55287 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH11P55287 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH11P55287 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH11P55287 AC018445.3-201ENST00000624177 1945 ntBASIC18.23■□□□□ 0.51
CDH11P55287 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH11P55287 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH11P55287 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH11P55287 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH11P55287 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDH11P55287 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH11P55287 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH11P55287 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDH11P55287 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH11P55287 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH11P55287 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
CDH11P55287 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CDH11P55287 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH11P55287 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CDH11P55287 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH11P55287 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH11P55287 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH11P55287 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH11P55287 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH11P55287 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH11P55287 AL050303.2-201ENST00000619798 666 ntBASIC18.22■□□□□ 0.51
CDH11P55287 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDH11P55287 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH11P55287 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH11P55287 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDH11P55287 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH11P55287 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH11P55287 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH11P55287 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH11P55287 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH11P55287 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDH11P55287 SLC7A5P2-201ENST00000553010 536 ntBASIC18.21■□□□□ 0.51
CDH11P55287 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms