Protein–RNA interactions for Protein: P53866

SQS1, Protein SQS1, yeastyeast

Known RBP Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SQS1P53866 YNL338WYNL338W 159 nt1.35□□□□□ -2.19
SQS1P53866 YOR381W-AYOR381W-A 168 nt1.35□□□□□ -2.19
SQS1P53866 UTP20YBL004W 7482 nt1.34□□□□□ -2.19
SQS1P53866 TAH1YCR060W 336 nt1.33□□□□□ -2.2
SQS1P53866 COX5BYIL111W 456 nt1.33□□□□□ -2.2
SQS1P53866 PRP16YKR086W 3216 nt1.33□□□□□ -2.2
SQS1P53866 SMC1YFL008W 3678 nt1.32□□□□□ -2.2
SQS1P53866 YER053C-AYER053C-A 114 nt1.32□□□□□ -2.2
SQS1P53866 YFR012W-AYFR012W-A 87 nt1.32□□□□□ -2.2
SQS1P53866 YIL020C-AYIL020C-A 339 nt1.32□□□□□ -2.2
SQS1P53866 RPL26BYGR034W 384 nt1.31□□□□□ -2.2
SQS1P53866 YKL100W-AYKL100W-A 90 nt1.31□□□□□ -2.2
SQS1P53866 YLR282CYLR282C 342 nt1.31□□□□□ -2.2
SQS1P53866 YOR161W-AYOR161W-A 81 nt1.31□□□□□ -2.2
SQS1P53866 SEC21YNL287W 2808 nt1.31□□□□□ -2.2
SQS1P53866 BFR2YDR299W 1605 nt1.29□□□□□ -2.2
SQS1P53866 UTP8YGR128C 2142 nt1.29□□□□□ -2.2
SQS1P53866 YLR041WYLR041W 321 nt1.28□□□□□ -2.2
SQS1P53866 PRP42YDR235W 1635 nt1.27□□□□□ -2.21
SQS1P53866 YKL145W-AYKL145W-A 93 nt1.27□□□□□ -2.21
SQS1P53866 snR190snR190 190 nt1.27□□□□□ -2.21
SQS1P53866 GEA2YEL022W 4380 nt1.26□□□□□ -2.21
SQS1P53866 YML002WYML002W 2214 nt1.24□□□□□ -2.21
SQS1P53866 PRP5YBR237W 2550 nt1.23□□□□□ -2.21
SQS1P53866 YIL142C-AYIL142C-A 333 nt1.22□□□□□ -2.21
SQS1P53866 SEC8YPR055W 3198 nt1.22□□□□□ -2.21
SQS1P53866 RAD9YDR217C 3930 nt1.21□□□□□ -2.22
SQS1P53866 RPM2YML091C 3609 nt1.2□□□□□ -2.22
SQS1P53866 YDL073WYDL073W 2955 nt1.19□□□□□ -2.22
SQS1P53866 NST1YNL091W 3723 nt1.19□□□□□ -2.22
SQS1P53866 YDL007C-AYDL007C-A 258 nt1.19□□□□□ -2.22
SQS1P53866 FYV10YIL097W 1551 nt1.19□□□□□ -2.22
SQS1P53866 YJR029WYJR029W 5268 nt1.19□□□□□ -2.22
SQS1P53866 YPR137C-BYPR137C-B 5268 nt1.19□□□□□ -2.22
SQS1P53866 YPR160W-AYPR160W-A 81 nt1.17□□□□□ -2.22
SQS1P53866 BIR1YJR089W 2865 nt1.16□□□□□ -2.22
SQS1P53866 UBP3YER151C 2739 nt1.16□□□□□ -2.22
SQS1P53866 YGL182CYGL182C 324 nt1.16□□□□□ -2.22
SQS1P53866 YLR399W-AYLR399W-A 105 nt1.16□□□□□ -2.22
SQS1P53866 snR48snR48 113 nt1.16□□□□□ -2.22
SQS1P53866 YMR160WYMR160W 2451 nt1.16□□□□□ -2.22
SQS1P53866 VAM6YDL077C 3150 nt1.15□□□□□ -2.22
SQS1P53866 YBL039C-AYBL039C-A 84 nt1.15□□□□□ -2.23
SQS1P53866 YOR170WYOR170W 306 nt1.14□□□□□ -2.23
SQS1P53866 SPT7YBR081C 3999 nt1.14□□□□□ -2.23
SQS1P53866 YBL053WYBL053W 375 nt1.13□□□□□ -2.23
SQS1P53866 YOR102WYOR102W 351 nt1.12□□□□□ -2.23
SQS1P53866 SNU13YEL026W 381 nt1.11□□□□□ -2.23
SQS1P53866 SCC2YDR180W 4482 nt1.1□□□□□ -2.23
SQS1P53866 tN(GUU)QtN(GUU)Q 71 nt1.09□□□□□ -2.23
SQS1P53866 YHL015W-AYHL015W-A 84 nt1.09□□□□□ -2.23
SQS1P53866 YHR131W-AYHR131W-A 246 nt1.09□□□□□ -2.23
SQS1P53866 Q0092Q0092 141 nt1.08□□□□□ -2.24
SQS1P53866 ATP8Q0080 147 nt1.07□□□□□ -2.24
SQS1P53866 YLR232WYLR232W 348 nt1.07□□□□□ -2.24
SQS1P53866 BEM2YER155C 6504 nt1.06□□□□□ -2.24
SQS1P53866 CHS6YJL099W 2241 nt1.06□□□□□ -2.24
SQS1P53866 BUD3YCL014W 4911 nt1.06□□□□□ -2.24
SQS1P53866 tL(UAA)QtL(UAA)Q 85 nt1.05□□□□□ -2.24
SQS1P53866 YGR164WYGR164W 336 nt1.05□□□□□ -2.24
SQS1P53866 YSP1YHR155W 3687 nt1.03□□□□□ -2.24
SQS1P53866 YOR314W-AYOR314W-A 111 nt1.03□□□□□ -2.24
SQS1P53866 OST4YDL232W 111 nt1.02□□□□□ -2.25
SQS1P53866 SDH6YDR379C-A 240 nt1.01□□□□□ -2.25
SQS1P53866 YNL170WYNL170W 396 nt1.01□□□□□ -2.25
SQS1P53866 YPR117WYPR117W 7470 nt1.01□□□□□ -2.25
SQS1P53866 RKR1YMR247C 4689 nt1□□□□□ -2.25
SQS1P53866 YOR329W-AYOR329W-A 210 nt0.98□□□□□ -2.25
SQS1P53866 MYO1YHR023W 5787 nt0.97□□□□□ -2.25
SQS1P53866 EMT1tM(CAU)D 73 nt0.97□□□□□ -2.25
SQS1P53866 EMT5tM(CAU)J1 73 nt0.97□□□□□ -2.25
SQS1P53866 EMT3tM(CAU)J2 73 nt0.97□□□□□ -2.25
SQS1P53866 EMT4tM(CAU)M 73 nt0.97□□□□□ -2.25
SQS1P53866 EMT2tM(CAU)O2 73 nt0.97□□□□□ -2.25
SQS1P53866 BEM3YPL115C 3387 nt0.97□□□□□ -2.25
SQS1P53866 ULP2YIL031W 3105 nt0.95□□□□□ -2.26
SQS1P53866 YDR544CYDR544C 429 nt0.95□□□□□ -2.26
SQS1P53866 YPL060C-AYPL060C-A 3315 nt0.94□□□□□ -2.26
SQS1P53866 snR39BsnR39B 96 nt0.94□□□□□ -2.26
SQS1P53866 COG6YNL041C 2520 nt0.94□□□□□ -2.26
SQS1P53866 LTE1YAL024C 4308 nt0.92□□□□□ -2.26
SQS1P53866 SEC1YDR164C 2175 nt0.91□□□□□ -2.26
SQS1P53866 BUL2YML111W 2763 nt0.91□□□□□ -2.26
SQS1P53866 tM(CAU)Q2tM(CAU)Q2 78 nt0.89□□□□□ -2.27
SQS1P53866 YJL127W-AYJL127W-A 117 nt0.89□□□□□ -2.27
SQS1P53866 tT(AGU)BtT(AGU)B 73 nt0.88□□□□□ -2.27
SQS1P53866 tT(AGU)CtT(AGU)C 73 nt0.88□□□□□ -2.27
SQS1P53866 tT(AGU)DtT(AGU)D 73 nt0.88□□□□□ -2.27
SQS1P53866 tT(AGU)HtT(AGU)H 73 nt0.88□□□□□ -2.27
SQS1P53866 tT(AGU)I1tT(AGU)I1 73 nt0.88□□□□□ -2.27
SQS1P53866 tT(AGU)I2tT(AGU)I2 73 nt0.88□□□□□ -2.27
SQS1P53866 tT(AGU)JtT(AGU)J 73 nt0.88□□□□□ -2.27
SQS1P53866 tT(AGU)N1tT(AGU)N1 73 nt0.88□□□□□ -2.27
SQS1P53866 tT(AGU)N2tT(AGU)N2 73 nt0.88□□□□□ -2.27
SQS1P53866 tT(AGU)O1tT(AGU)O1 73 nt0.88□□□□□ -2.27
SQS1P53866 tT(AGU)O2tT(AGU)O2 73 nt0.88□□□□□ -2.27
SQS1P53866 YNL067W-BYNL067W-B 141 nt0.88□□□□□ -2.27
SQS1P53866 GLG1YKR058W 1851 nt0.87□□□□□ -2.27
SQS1P53866 YBR072C-AYBR072C-A 162 nt0.87□□□□□ -2.27
SQS1P53866 YDR210WYDR210W 228 nt0.86□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms