Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.6■□□□□ 0.73
CLCNKAP51800 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCNKAP51800 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCNKAP51800 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCNKAP51800 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLCNKAP51800 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCNKAP51800 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCNKAP51800 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCNKAP51800 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.59■□□□□ 0.73
CLCNKAP51800 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCNKAP51800 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.59■□□□□ 0.73
CLCNKAP51800 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCNKAP51800 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCNKAP51800 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCNKAP51800 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.59■□□□□ 0.73
CLCNKAP51800 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CLCNKAP51800 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCNKAP51800 AL121829.2-201ENST00000620908 328 ntBASIC19.59■□□□□ 0.73
CLCNKAP51800 AL359736.2-201ENST00000621992 437 ntBASIC19.59■□□□□ 0.73
CLCNKAP51800 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCNKAP51800 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCNKAP51800 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCNKAP51800 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCNKAP51800 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCNKAP51800 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCNKAP51800 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCNKAP51800 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCNKAP51800 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLCNKAP51800 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLCNKAP51800 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CLCNKAP51800 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CLCNKAP51800 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CLCNKAP51800 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLCNKAP51800 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLCNKAP51800 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLCNKAP51800 FEM1AP1-201ENST00000431297 1995 ntBASIC19.58■□□□□ 0.73
CLCNKAP51800 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.58■□□□□ 0.72
CLCNKAP51800 RPS2P52-201ENST00000469610 820 ntBASIC19.58■□□□□ 0.72
CLCNKAP51800 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLCNKAP51800 RPPH1-201ENST00000516869 333 ntBASIC19.58■□□□□ 0.72
CLCNKAP51800 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.58■□□□□ 0.72
CLCNKAP51800 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.58■□□□□ 0.72
CLCNKAP51800 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CLCNKAP51800 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCNKAP51800 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCNKAP51800 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCNKAP51800 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCNKAP51800 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.57■□□□□ 0.72
CLCNKAP51800 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCNKAP51800 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCNKAP51800 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLCNKAP51800 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLCNKAP51800 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLCNKAP51800 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CLCNKAP51800 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CLCNKAP51800 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLCNKAP51800 AC133681.1-201ENST00000465482 601 ntBASIC19.57■□□□□ 0.72
CLCNKAP51800 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCNKAP51800 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLCNKAP51800 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCNKAP51800 AC066615.1-201ENST00000640911 628 ntBASIC19.57■□□□□ 0.72
CLCNKAP51800 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCNKAP51800 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCNKAP51800 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLCNKAP51800 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCNKAP51800 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCNKAP51800 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.57■□□□□ 0.72
CLCNKAP51800 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CLCNKAP51800 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
CLCNKAP51800 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CLCNKAP51800 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CLCNKAP51800 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 AP005212.1-201ENST00000581547 1997 ntBASIC19.56■□□□□ 0.72
CLCNKAP51800 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCNKAP51800 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCNKAP51800 UBE2SP1-201ENST00000450587 669 ntBASIC19.56■□□□□ 0.72
CLCNKAP51800 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.56■□□□□ 0.72
CLCNKAP51800 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.56■□□□□ 0.72
CLCNKAP51800 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCNKAP51800 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms