Protein–RNA interactions for Protein: P48353

HLJ1, Protein HLJ1, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HLJ1P48353 YIL020C-AYIL020C-A 339 nt1.25□□□□□ -2.21
HLJ1P48353 YPR160W-AYPR160W-A 81 nt1.25□□□□□ -2.21
HLJ1P48353 BFR2YDR299W 1605 nt1.25□□□□□ -2.21
HLJ1P48353 PRP39YML046W 1890 nt1.24□□□□□ -2.21
HLJ1P48353 YEL073CYEL073C 324 nt1.23□□□□□ -2.21
HLJ1P48353 YER053C-AYER053C-A 114 nt1.23□□□□□ -2.21
HLJ1P48353 TRS65YGR166W 1683 nt1.21□□□□□ -2.22
HLJ1P48353 SCC2YDR180W 4482 nt1.21□□□□□ -2.22
HLJ1P48353 snR52snR52 92 nt1.2□□□□□ -2.22
HLJ1P48353 YSP1YHR155W 3687 nt1.2□□□□□ -2.22
HLJ1P48353 SPT7YBR081C 3999 nt1.2□□□□□ -2.22
HLJ1P48353 PRP42YDR235W 1635 nt1.19□□□□□ -2.22
HLJ1P48353 tV(UAC)BtV(UAC)B 74 nt1.18□□□□□ -2.22
HLJ1P48353 tV(UAC)DtV(UAC)D 74 nt1.18□□□□□ -2.22
HLJ1P48353 SIP4YJL089W 2490 nt1.18□□□□□ -2.22
HLJ1P48353 YNL338WYNL338W 159 nt1.17□□□□□ -2.22
HLJ1P48353 FYV10YIL097W 1551 nt1.17□□□□□ -2.22
HLJ1P48353 PRP5YBR237W 2550 nt1.16□□□□□ -2.22
HLJ1P48353 YNL284C-BYNL284C-B 5268 nt1.14□□□□□ -2.23
HLJ1P48353 YOR381W-AYOR381W-A 168 nt1.14□□□□□ -2.23
HLJ1P48353 UTP8YGR128C 2142 nt1.13□□□□□ -2.23
HLJ1P48353 LTE1YAL024C 4308 nt1.13□□□□□ -2.23
HLJ1P48353 QCR9YGR183C 201 nt1.11□□□□□ -2.23
HLJ1P48353 YPR117WYPR117W 7470 nt1.1□□□□□ -2.23
HLJ1P48353 YHR131W-AYHR131W-A 246 nt1.1□□□□□ -2.23
HLJ1P48353 BEM3YPL115C 3387 nt1.1□□□□□ -2.23
HLJ1P48353 CHS6YJL099W 2241 nt1.08□□□□□ -2.24
HLJ1P48353 OST4YDL232W 111 nt1.07□□□□□ -2.24
HLJ1P48353 EMT1tM(CAU)D 73 nt1.07□□□□□ -2.24
HLJ1P48353 EMT5tM(CAU)J1 73 nt1.07□□□□□ -2.24
HLJ1P48353 EMT3tM(CAU)J2 73 nt1.07□□□□□ -2.24
HLJ1P48353 EMT4tM(CAU)M 73 nt1.07□□□□□ -2.24
HLJ1P48353 EMT2tM(CAU)O2 73 nt1.07□□□□□ -2.24
HLJ1P48353 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
HLJ1P48353 tN(GUU)QtN(GUU)Q 71 nt1.06□□□□□ -2.24
HLJ1P48353 YBL039C-AYBL039C-A 84 nt1.06□□□□□ -2.24
HLJ1P48353 UBP3YER151C 2739 nt1.06□□□□□ -2.24
HLJ1P48353 tF(GAA)BtF(GAA)B 73 nt1.05□□□□□ -2.24
HLJ1P48353 tF(GAA)FtF(GAA)F 73 nt1.05□□□□□ -2.24
HLJ1P48353 tF(GAA)GtF(GAA)G 73 nt1.05□□□□□ -2.24
HLJ1P48353 tF(GAA)H1tF(GAA)H1 73 nt1.05□□□□□ -2.24
HLJ1P48353 tF(GAA)H2tF(GAA)H2 73 nt1.05□□□□□ -2.24
HLJ1P48353 tF(GAA)MtF(GAA)M 73 nt1.05□□□□□ -2.24
HLJ1P48353 tF(GAA)P1tF(GAA)P1 73 nt1.05□□□□□ -2.24
HLJ1P48353 tF(GAA)P2tF(GAA)P2 73 nt1.05□□□□□ -2.24
HLJ1P48353 YGL182CYGL182C 324 nt1.05□□□□□ -2.24
HLJ1P48353 YLR232WYLR232W 348 nt1.04□□□□□ -2.24
HLJ1P48353 YOR170WYOR170W 306 nt1.04□□□□□ -2.24
HLJ1P48353 TAH1YCR060W 336 nt1.03□□□□□ -2.24
HLJ1P48353 YDL007C-AYDL007C-A 258 nt1.03□□□□□ -2.24
HLJ1P48353 SNU13YEL026W 381 nt1.03□□□□□ -2.24
HLJ1P48353 RKR1YMR247C 4689 nt1.01□□□□□ -2.25
HLJ1P48353 snR48snR48 113 nt1.01□□□□□ -2.25
HLJ1P48353 UTP20YBL004W 7482 nt1.01□□□□□ -2.25
HLJ1P48353 DOP1YDR141C 5097 nt1□□□□□ -2.25
HLJ1P48353 YHL015W-AYHL015W-A 84 nt0.99□□□□□ -2.25
HLJ1P48353 BEM2YER155C 6504 nt0.98□□□□□ -2.25
HLJ1P48353 Q0092Q0092 141 nt0.96□□□□□ -2.26
HLJ1P48353 YOR102WYOR102W 351 nt0.96□□□□□ -2.26
HLJ1P48353 IQG1YPL242C 4488 nt0.95□□□□□ -2.26
HLJ1P48353 YJL127W-AYJL127W-A 117 nt0.95□□□□□ -2.26
HLJ1P48353 SEC1YDR164C 2175 nt0.95□□□□□ -2.26
HLJ1P48353 ULP2YIL031W 3105 nt0.95□□□□□ -2.26
HLJ1P48353 YBL053WYBL053W 375 nt0.94□□□□□ -2.26
HLJ1P48353 ATP8Q0080 147 nt0.93□□□□□ -2.26
HLJ1P48353 YGR164WYGR164W 336 nt0.92□□□□□ -2.26
HLJ1P48353 YOL014WYOL014W 375 nt0.9□□□□□ -2.27
HLJ1P48353 YOR314W-AYOR314W-A 111 nt0.9□□□□□ -2.27
HLJ1P48353 YJR029WYJR029W 5268 nt0.89□□□□□ -2.27
HLJ1P48353 YPR137C-BYPR137C-B 5268 nt0.89□□□□□ -2.27
HLJ1P48353 SDH6YDR379C-A 240 nt0.88□□□□□ -2.27
HLJ1P48353 tL(UAA)QtL(UAA)Q 85 nt0.88□□□□□ -2.27
HLJ1P48353 YIL142C-AYIL142C-A 333 nt0.88□□□□□ -2.27
HLJ1P48353 YNL170WYNL170W 396 nt0.88□□□□□ -2.27
HLJ1P48353 NNF2YGR089W 2811 nt0.88□□□□□ -2.27
HLJ1P48353 GLG1YKR058W 1851 nt0.87□□□□□ -2.27
HLJ1P48353 COG6YNL041C 2520 nt0.87□□□□□ -2.27
HLJ1P48353 YBR072C-AYBR072C-A 162 nt0.86□□□□□ -2.27
HLJ1P48353 BUL2YML111W 2763 nt0.86□□□□□ -2.27
HLJ1P48353 BUD3YCL014W 4911 nt0.84□□□□□ -2.27
HLJ1P48353 YPL060C-AYPL060C-A 3315 nt0.84□□□□□ -2.27
HLJ1P48353 YDR544CYDR544C 429 nt0.83□□□□□ -2.28
HLJ1P48353 YOR329W-AYOR329W-A 210 nt0.83□□□□□ -2.28
HLJ1P48353 YMR160WYMR160W 2451 nt0.82□□□□□ -2.28
HLJ1P48353 MLP1YKR095W 5628 nt0.82□□□□□ -2.28
HLJ1P48353 tM(CAU)Q2tM(CAU)Q2 78 nt0.81□□□□□ -2.28
HLJ1P48353 YLL006W-AYLL006W-A 177 nt0.81□□□□□ -2.28
HLJ1P48353 PET111YMR257C 2403 nt0.81□□□□□ -2.28
HLJ1P48353 NIP1YMR309C 2439 nt0.81□□□□□ -2.28
HLJ1P48353 BIR1YJR089W 2865 nt0.78□□□□□ -2.29
HLJ1P48353 YKL145W-AYKL145W-A 93 nt0.77□□□□□ -2.29
HLJ1P48353 YNL067W-BYNL067W-B 141 nt0.77□□□□□ -2.29
HLJ1P48353 YPR159C-AYPR159C-A 102 nt0.77□□□□□ -2.29
HLJ1P48353 snR39BsnR39B 96 nt0.76□□□□□ -2.29
HLJ1P48353 RPS26AYGL189C 360 nt0.75□□□□□ -2.29
HLJ1P48353 tT(AGU)BtT(AGU)B 73 nt0.73□□□□□ -2.29
HLJ1P48353 tT(AGU)CtT(AGU)C 73 nt0.73□□□□□ -2.29
HLJ1P48353 tT(AGU)DtT(AGU)D 73 nt0.73□□□□□ -2.29
HLJ1P48353 tT(AGU)HtT(AGU)H 73 nt0.73□□□□□ -2.29
HLJ1P48353 tT(AGU)I1tT(AGU)I1 73 nt0.73□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 32.7 ms