Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR2P43308 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSR2P43308 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSR2P43308 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SSR2P43308 BX119927.1-201ENST00000636596 1552 ntBASIC19.07■□□□□ 0.64
SSR2P43308 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR2P43308 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SSR2P43308 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
SSR2P43308 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.07■□□□□ 0.64
SSR2P43308 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.07■□□□□ 0.64
SSR2P43308 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.07■□□□□ 0.64
SSR2P43308 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSR2P43308 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.07■□□□□ 0.64
SSR2P43308 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR2P43308 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.07■□□□□ 0.64
SSR2P43308 AL138781.1-201ENST00000566567 1274 ntBASIC19.07■□□□□ 0.64
SSR2P43308 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
SSR2P43308 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
SSR2P43308 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR2P43308 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR2P43308 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR2P43308 KRT8P20-201ENST00000423953 1409 ntBASIC19.07■□□□□ 0.64
SSR2P43308 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSR2P43308 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSR2P43308 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.07■□□□□ 0.64
SSR2P43308 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.06■□□□□ 0.64
SSR2P43308 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SSR2P43308 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.06■□□□□ 0.64
SSR2P43308 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSR2P43308 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
SSR2P43308 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSR2P43308 HLA-G-202ENST00000376815 851 ntBASIC19.06■□□□□ 0.64
SSR2P43308 HLA-G-203ENST00000376818 1127 ntBASIC19.06■□□□□ 0.64
SSR2P43308 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SSR2P43308 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.06■□□□□ 0.64
SSR2P43308 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.06■□□□□ 0.64
SSR2P43308 AC091874.3-201ENST00000512672 1195 ntBASIC19.06■□□□□ 0.64
SSR2P43308 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
SSR2P43308 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.06■□□□□ 0.64
SSR2P43308 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSR2P43308 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
SSR2P43308 KRT8P17-201ENST00000453110 1448 ntBASIC19.06■□□□□ 0.64
SSR2P43308 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SSR2P43308 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.06■□□□□ 0.64
SSR2P43308 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSR2P43308 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SSR2P43308 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR2P43308 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR2P43308 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.05■□□□□ 0.64
SSR2P43308 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.05■□□□□ 0.64
SSR2P43308 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR2P43308 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.05■□□□□ 0.64
SSR2P43308 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.05■□□□□ 0.64
SSR2P43308 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR2P43308 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SSR2P43308 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR2P43308 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.05■□□□□ 0.64
SSR2P43308 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR2P43308 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.05■□□□□ 0.64
SSR2P43308 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR2P43308 HLA-L-209ENST00000420110 1011 ntBASIC19.05■□□□□ 0.64
SSR2P43308 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.05■□□□□ 0.64
SSR2P43308 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSR2P43308 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.05■□□□□ 0.64
SSR2P43308 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
SSR2P43308 AC098934.4-201ENST00000564127 592 ntBASIC19.05■□□□□ 0.64
SSR2P43308 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.05■□□□□ 0.64
SSR2P43308 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR2P43308 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR2P43308 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR2P43308 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR2P43308 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSR2P43308 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSR2P43308 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR2P43308 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSR2P43308 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR2P43308 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSR2P43308 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.04■□□□□ 0.64
SSR2P43308 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSR2P43308 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSR2P43308 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR2P43308 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.04■□□□□ 0.64
SSR2P43308 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR2P43308 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.04■□□□□ 0.64
SSR2P43308 AC097658.1-201ENST00000475555 843 ntBASIC19.04■□□□□ 0.64
SSR2P43308 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.04■□□□□ 0.64
SSR2P43308 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.04■□□□□ 0.64
SSR2P43308 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR2P43308 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR2P43308 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR2P43308 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR2P43308 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.04■□□□□ 0.64
SSR2P43308 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.04■□□□□ 0.64
SSR2P43308 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSR2P43308 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.04■□□□□ 0.64
SSR2P43308 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR2P43308 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSR2P43308 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSR2P43308 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SSR2P43308 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms