Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.9■□□□□ 0.78
CTSKP43235 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CTSKP43235 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTSKP43235 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.9■□□□□ 0.78
CTSKP43235 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.9■□□□□ 0.78
CTSKP43235 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTSKP43235 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.9■□□□□ 0.78
CTSKP43235 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.9■□□□□ 0.78
CTSKP43235 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CTSKP43235 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CTSKP43235 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.9■□□□□ 0.78
CTSKP43235 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CTSKP43235 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTSKP43235 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CTSKP43235 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSKP43235 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSKP43235 AC011484.1-201ENST00000377652 1995 ntBASIC19.89■□□□□ 0.77
CTSKP43235 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSKP43235 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CTSKP43235 AC087499.1-201ENST00000418141 1075 ntBASIC19.89■□□□□ 0.77
CTSKP43235 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CTSKP43235 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.89■□□□□ 0.77
CTSKP43235 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CTSKP43235 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.89■□□□□ 0.77
CTSKP43235 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTSKP43235 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSKP43235 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSKP43235 AL355075.4-201ENST00000554988 638 ntBASIC19.89■□□□□ 0.77
CTSKP43235 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
CTSKP43235 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.89■□□□□ 0.77
CTSKP43235 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CTSKP43235 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSKP43235 AC133561.5-201ENST00000635547 218 ntBASIC19.89■□□□□ 0.77
CTSKP43235 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CTSKP43235 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSKP43235 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.88■□□□□ 0.77
CTSKP43235 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSKP43235 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSKP43235 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.88■□□□□ 0.77
CTSKP43235 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CTSKP43235 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSKP43235 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CTSKP43235 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSKP43235 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.88■□□□□ 0.77
CTSKP43235 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSKP43235 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSKP43235 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTSKP43235 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTSKP43235 KRT18P21-201ENST00000515767 1272 ntBASIC19.88■□□□□ 0.77
CTSKP43235 AC010331.1-201ENST00000611423 582 ntBASIC19.88■□□□□ 0.77
CTSKP43235 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CTSKP43235 AL121829.2-201ENST00000620908 328 ntBASIC19.88■□□□□ 0.77
CTSKP43235 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CTSKP43235 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSKP43235 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSKP43235 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSKP43235 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSKP43235 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSKP43235 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTSKP43235 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CTSKP43235 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSKP43235 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.87■□□□□ 0.77
CTSKP43235 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.87■□□□□ 0.77
CTSKP43235 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CTSKP43235 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.87■□□□□ 0.77
CTSKP43235 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.87■□□□□ 0.77
CTSKP43235 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.87■□□□□ 0.77
CTSKP43235 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.87■□□□□ 0.77
CTSKP43235 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CTSKP43235 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CTSKP43235 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.87■□□□□ 0.77
CTSKP43235 AC023632.3-201ENST00000521633 145 ntBASIC19.87■□□□□ 0.77
CTSKP43235 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.87■□□□□ 0.77
CTSKP43235 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 AC244015.2-201ENST00000616358 1861 ntBASIC19.87■□□□□ 0.77
CTSKP43235 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.87■□□□□ 0.77
CTSKP43235 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.87■□□□□ 0.77
CTSKP43235 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CTSKP43235 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSKP43235 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTSKP43235 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSKP43235 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSKP43235 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTSKP43235 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms