Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HTTP42858 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HTTP42858 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HTTP42858 FSCN1P1-201ENST00000568912 1481 ntBASIC22.66■■□□□ 1.22
HTTP42858 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.66■■□□□ 1.22
HTTP42858 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.65■■□□□ 1.22
HTTP42858 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
HTTP42858 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
HTTP42858 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC22.65■■□□□ 1.22
HTTP42858 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.65■■□□□ 1.22
HTTP42858 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HTTP42858 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
HTTP42858 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HTTP42858 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
HTTP42858 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HTTP42858 PCED1CP-201ENST00000419887 785 ntBASIC22.65■■□□□ 1.22
HTTP42858 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC22.65■■□□□ 1.22
HTTP42858 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.65■■□□□ 1.22
HTTP42858 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
HTTP42858 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.64■■□□□ 1.22
HTTP42858 IER3-202ENST00000376377 1350 ntBASIC22.64■■□□□ 1.22
HTTP42858 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.64■■□□□ 1.22
HTTP42858 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HTTP42858 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
HTTP42858 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HTTP42858 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HTTP42858 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.64■■□□□ 1.21
HTTP42858 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.64■■□□□ 1.21
HTTP42858 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.64■■□□□ 1.21
HTTP42858 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.64■■□□□ 1.21
HTTP42858 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.64■■□□□ 1.21
HTTP42858 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
HTTP42858 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.64■■□□□ 1.21
HTTP42858 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.64■■□□□ 1.21
HTTP42858 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.64■■□□□ 1.21
HTTP42858 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HTTP42858 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HTTP42858 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
HTTP42858 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HTTP42858 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
HTTP42858 TSPY21P-201ENST00000433481 731 ntBASIC22.63■■□□□ 1.21
HTTP42858 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.63■■□□□ 1.21
HTTP42858 TSPY23P-201ENST00000440136 739 ntBASIC22.63■■□□□ 1.21
HTTP42858 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.63■■□□□ 1.21
HTTP42858 KRT18P16-201ENST00000510337 1294 ntBASIC22.63■■□□□ 1.21
HTTP42858 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.63■■□□□ 1.21
HTTP42858 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HTTP42858 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
HTTP42858 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HTTP42858 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.63■■□□□ 1.21
HTTP42858 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.63■■□□□ 1.21
HTTP42858 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.63■■□□□ 1.21
HTTP42858 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC22.62■■□□□ 1.21
HTTP42858 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.62■■□□□ 1.21
HTTP42858 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.62■■□□□ 1.21
HTTP42858 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HTTP42858 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HTTP42858 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HTTP42858 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC22.62■■□□□ 1.21
HTTP42858 AC011558.1-201ENST00000623459 338 ntBASIC22.62■■□□□ 1.21
HTTP42858 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HTTP42858 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HTTP42858 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HTTP42858 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
HTTP42858 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HTTP42858 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC22.62■■□□□ 1.21
HTTP42858 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.62■■□□□ 1.21
HTTP42858 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
HTTP42858 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HTTP42858 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HTTP42858 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.61■■□□□ 1.21
HTTP42858 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.61■■□□□ 1.21
HTTP42858 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC22.61■■□□□ 1.21
HTTP42858 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
HTTP42858 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.61■■□□□ 1.21
HTTP42858 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.61■■□□□ 1.21
HTTP42858 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
HTTP42858 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.61■■□□□ 1.21
HTTP42858 AL691432.3-201ENST00000621860 400 ntBASIC22.61■■□□□ 1.21
HTTP42858 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HTTP42858 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HTTP42858 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HTTP42858 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HTTP42858 AC127496.7-201ENST00000625110 1798 ntBASIC22.6■■□□□ 1.21
HTTP42858 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HTTP42858 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HTTP42858 FDX1P1-201ENST00000449115 551 ntBASIC22.6■■□□□ 1.21
HTTP42858 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HTTP42858 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HTTP42858 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HTTP42858 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HTTP42858 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HTTP42858 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HTTP42858 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HTTP42858 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HTTP42858 HMGA1P5-201ENST00000412453 271 ntBASIC22.6■■□□□ 1.21
HTTP42858 AC097488.1-201ENST00000507834 756 ntBASIC22.6■■□□□ 1.21
HTTP42858 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.6■■□□□ 1.21
HTTP42858 AC083849.1-201ENST00000615227 514 ntBASIC22.6■■□□□ 1.21
HTTP42858 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms