Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CDKN1AP38936 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN1AP38936 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN1AP38936 KRT18P21-201ENST00000515767 1272 ntBASIC17.07■□□□□ 0.32
CDKN1AP38936 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN1AP38936 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
CDKN1AP38936 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN1AP38936 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.07■□□□□ 0.32
CDKN1AP38936 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN1AP38936 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.07■□□□□ 0.32
CDKN1AP38936 AC133561.5-201ENST00000635547 218 ntBASIC17.07■□□□□ 0.32
CDKN1AP38936 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDKN1AP38936 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDKN1AP38936 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN1AP38936 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDKN1AP38936 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN1AP38936 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKN1AP38936 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN1AP38936 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDKN1AP38936 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN1AP38936 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKN1AP38936 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKN1AP38936 AC023632.3-201ENST00000521633 145 ntBASIC17.06■□□□□ 0.32
CDKN1AP38936 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.06■□□□□ 0.32
CDKN1AP38936 AL355075.4-201ENST00000554988 638 ntBASIC17.06■□□□□ 0.32
CDKN1AP38936 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.06■□□□□ 0.32
CDKN1AP38936 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.06■□□□□ 0.32
CDKN1AP38936 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.06■□□□□ 0.32
CDKN1AP38936 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.06■□□□□ 0.32
CDKN1AP38936 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.06■□□□□ 0.32
CDKN1AP38936 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN1AP38936 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN1AP38936 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CDKN1AP38936 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDKN1AP38936 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 AC121338.2-201ENST00000622535 1744 ntBASIC17.05■□□□□ 0.32
CDKN1AP38936 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDKN1AP38936 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKN1AP38936 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.05■□□□□ 0.32
CDKN1AP38936 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDKN1AP38936 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.05■□□□□ 0.32
CDKN1AP38936 FAM210CP-201ENST00000445714 574 ntBASIC17.05■□□□□ 0.32
CDKN1AP38936 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKN1AP38936 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.05■□□□□ 0.32
CDKN1AP38936 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.05■□□□□ 0.32
CDKN1AP38936 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.05■□□□□ 0.32
CDKN1AP38936 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKN1AP38936 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKN1AP38936 AL121829.2-201ENST00000620908 328 ntBASIC17.05■□□□□ 0.32
CDKN1AP38936 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.05■□□□□ 0.32
CDKN1AP38936 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.05■□□□□ 0.32
CDKN1AP38936 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDKN1AP38936 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.05■□□□□ 0.32
CDKN1AP38936 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKN1AP38936 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDKN1AP38936 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN1AP38936 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN1AP38936 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.04■□□□□ 0.32
CDKN1AP38936 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN1AP38936 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN1AP38936 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN1AP38936 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN1AP38936 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN1AP38936 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDKN1AP38936 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN1AP38936 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKN1AP38936 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.04■□□□□ 0.32
CDKN1AP38936 HTR7P1-201ENST00000538670 1336 ntBASIC17.04■□□□□ 0.32
CDKN1AP38936 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN1AP38936 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN1AP38936 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKN1AP38936 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDKN1AP38936 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN1AP38936 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN1AP38936 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN1AP38936 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKN1AP38936 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDKN1AP38936 MIR1224-201ENST00000408193 85 ntBASIC17.04■□□□□ 0.32
CDKN1AP38936 AC087499.1-201ENST00000418141 1075 ntBASIC17.04■□□□□ 0.32
CDKN1AP38936 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.04■□□□□ 0.32
CDKN1AP38936 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.04■□□□□ 0.32
CDKN1AP38936 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.04■□□□□ 0.32
CDKN1AP38936 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKN1AP38936 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKN1AP38936 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms