Protein–RNA interactions for Protein: P38358

VBA2, Vacuolar basic amino acid transporter 2, yeastyeast

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA2P38358 YNL284C-BYNL284C-B 5268 nt1.14□□□□□ -2.23
VBA2P38358 FYV10YIL097W 1551 nt1.13□□□□□ -2.23
VBA2P38358 KAP120YPL125W 3099 nt1.12□□□□□ -2.23
VBA2P38358 CLU1YMR012W 3834 nt1.12□□□□□ -2.23
VBA2P38358 YGL182CYGL182C 324 nt1.12□□□□□ -2.23
VBA2P38358 YLR041WYLR041W 321 nt1.12□□□□□ -2.23
VBA2P38358 YOR102WYOR102W 351 nt1.12□□□□□ -2.23
VBA2P38358 ATP8Q0080 147 nt1.11□□□□□ -2.23
VBA2P38358 YOR170WYOR170W 306 nt1.11□□□□□ -2.23
VBA2P38358 YBL039C-AYBL039C-A 84 nt1.1□□□□□ -2.23
VBA2P38358 SEC8YPR055W 3198 nt1.09□□□□□ -2.23
VBA2P38358 TAH1YCR060W 336 nt1.09□□□□□ -2.23
VBA2P38358 YGR164WYGR164W 336 nt1.08□□□□□ -2.24
VBA2P38358 snR48snR48 113 nt1.08□□□□□ -2.24
VBA2P38358 SPT7YBR081C 3999 nt1.06□□□□□ -2.24
VBA2P38358 SNU13YEL026W 381 nt1.06□□□□□ -2.24
VBA2P38358 YNL170WYNL170W 396 nt1.06□□□□□ -2.24
VBA2P38358 YPR160W-AYPR160W-A 81 nt1.06□□□□□ -2.24
VBA2P38358 PRP16YKR086W 3216 nt1.05□□□□□ -2.24
VBA2P38358 tL(UAA)QtL(UAA)Q 85 nt1.05□□□□□ -2.24
VBA2P38358 YLR399W-AYLR399W-A 105 nt1.05□□□□□ -2.24
VBA2P38358 SDH6YDR379C-A 240 nt1.04□□□□□ -2.24
VBA2P38358 YLR232WYLR232W 348 nt1.04□□□□□ -2.24
VBA2P38358 YOR314W-AYOR314W-A 111 nt1.04□□□□□ -2.24
VBA2P38358 CHS6YJL099W 2241 nt1.03□□□□□ -2.24
VBA2P38358 ANS1YHR126C 480 nt1.03□□□□□ -2.24
VBA2P38358 tV(UAC)BtV(UAC)B 74 nt1.03□□□□□ -2.24
VBA2P38358 tV(UAC)DtV(UAC)D 74 nt1.03□□□□□ -2.24
VBA2P38358 IML1YJR138W 4755 nt1.03□□□□□ -2.24
VBA2P38358 NST1YNL091W 3723 nt1.02□□□□□ -2.25
VBA2P38358 tN(GUU)QtN(GUU)Q 71 nt1.02□□□□□ -2.25
VBA2P38358 SIP4YJL089W 2490 nt1.01□□□□□ -2.25
VBA2P38358 YHR131W-AYHR131W-A 246 nt1.01□□□□□ -2.25
VBA2P38358 YGR130CYGR130C 2451 nt1□□□□□ -2.25
VBA2P38358 BUD3YCL014W 4911 nt1□□□□□ -2.25
VBA2P38358 YDR544CYDR544C 429 nt1□□□□□ -2.25
VBA2P38358 YOR329W-AYOR329W-A 210 nt1□□□□□ -2.25
VBA2P38358 YJR029WYJR029W 5268 nt0.97□□□□□ -2.25
VBA2P38358 YPR137C-BYPR137C-B 5268 nt0.97□□□□□ -2.25
VBA2P38358 RKR1YMR247C 4689 nt0.97□□□□□ -2.25
VBA2P38358 BEM3YPL115C 3387 nt0.95□□□□□ -2.26
VBA2P38358 QCR9YGR183C 201 nt0.94□□□□□ -2.26
VBA2P38358 UBP3YER151C 2739 nt0.94□□□□□ -2.26
VBA2P38358 VAM6YDL077C 3150 nt0.93□□□□□ -2.26
VBA2P38358 tM(CAU)Q2tM(CAU)Q2 78 nt0.93□□□□□ -2.26
VBA2P38358 YSP1YHR155W 3687 nt0.93□□□□□ -2.26
VBA2P38358 YDL073WYDL073W 2955 nt0.93□□□□□ -2.26
VBA2P38358 YPR117WYPR117W 7470 nt0.92□□□□□ -2.26
VBA2P38358 OST4YDL232W 111 nt0.92□□□□□ -2.26
VBA2P38358 snR39BsnR39B 96 nt0.92□□□□□ -2.26
VBA2P38358 COG6YNL041C 2520 nt0.91□□□□□ -2.26
VBA2P38358 SCC2YDR180W 4482 nt0.9□□□□□ -2.26
VBA2P38358 EMT1tM(CAU)D 73 nt0.9□□□□□ -2.27
VBA2P38358 EMT5tM(CAU)J1 73 nt0.9□□□□□ -2.27
VBA2P38358 EMT3tM(CAU)J2 73 nt0.9□□□□□ -2.27
VBA2P38358 EMT4tM(CAU)M 73 nt0.9□□□□□ -2.27
VBA2P38358 EMT2tM(CAU)O2 73 nt0.9□□□□□ -2.27
VBA2P38358 YNL067W-BYNL067W-B 141 nt0.9□□□□□ -2.27
VBA2P38358 YCL001W-BYCL001W-B 255 nt0.88□□□□□ -2.27
VBA2P38358 BEM2YER155C 6504 nt0.87□□□□□ -2.27
VBA2P38358 YBR072C-AYBR072C-A 162 nt0.87□□□□□ -2.27
VBA2P38358 YDR210WYDR210W 228 nt0.86□□□□□ -2.27
VBA2P38358 SEC1YDR164C 2175 nt0.86□□□□□ -2.27
VBA2P38358 YJL127W-AYJL127W-A 117 nt0.83□□□□□ -2.28
VBA2P38358 GLG1YKR058W 1851 nt0.81□□□□□ -2.28
VBA2P38358 SOM1YEL059C-A 225 nt0.8□□□□□ -2.28
VBA2P38358 YIL071W-AYIL071W-A 477 nt0.8□□□□□ -2.28
VBA2P38358 PAU24YBR301W 363 nt0.8□□□□□ -2.28
VBA2P38358 ULP2YIL031W 3105 nt0.8□□□□□ -2.28
VBA2P38358 NNF2YGR089W 2811 nt0.8□□□□□ -2.28
VBA2P38358 YLL006W-AYLL006W-A 177 nt0.79□□□□□ -2.28
VBA2P38358 RPM2YML091C 3609 nt0.79□□□□□ -2.28
VBA2P38358 YCR095W-AYCR095W-A 159 nt0.78□□□□□ -2.28
VBA2P38358 YGR146C-AYGR146C-A 162 nt0.78□□□□□ -2.28
VBA2P38358 YOR192C-BYOR192C-B 5313 nt0.77□□□□□ -2.29
VBA2P38358 YBR099CYBR099C 384 nt0.74□□□□□ -2.29
VBA2P38358 DOP1YDR141C 5097 nt0.74□□□□□ -2.29
VBA2P38358 PET111YMR257C 2403 nt0.72□□□□□ -2.29
VBA2P38358 NIP1YMR309C 2439 nt0.71□□□□□ -2.3
VBA2P38358 CSE1YGL238W 2883 nt0.7□□□□□ -2.3
VBA2P38358 YNL205CYNL205C 423 nt0.7□□□□□ -2.3
VBA2P38358 BUL2YML111W 2763 nt0.69□□□□□ -2.3
VBA2P38358 LTE1YAL024C 4308 nt0.69□□□□□ -2.3
VBA2P38358 RPS26AYGL189C 360 nt0.68□□□□□ -2.3
VBA2P38358 Q0143Q0143 153 nt0.68□□□□□ -2.3
VBA2P38358 PAU12YGR294W 363 nt0.68□□□□□ -2.3
VBA2P38358 YPR159C-AYPR159C-A 102 nt0.67□□□□□ -2.3
VBA2P38358 BIR1YJR089W 2865 nt0.67□□□□□ -2.3
VBA2P38358 MYO1YHR023W 5787 nt0.66□□□□□ -2.3
VBA2P38358 YDR371C-AYDR371C-A 105 nt0.66□□□□□ -2.3
VBA2P38358 HUG1YML058W-A 207 nt0.66□□□□□ -2.3
VBA2P38358 STF2YGR008C 255 nt0.63□□□□□ -2.31
VBA2P38358 YNL266WYNL266W 420 nt0.62□□□□□ -2.31
VBA2P38358 ORC3YLL004W 1851 nt0.62□□□□□ -2.31
VBA2P38358 YIL142C-AYIL142C-A 333 nt0.61□□□□□ -2.31
VBA2P38358 PMP2YEL017C-A 132 nt0.6□□□□□ -2.31
VBA2P38358 SBH1YER087C-B 249 nt0.59□□□□□ -2.31
VBA2P38358 tT(AGU)BtT(AGU)B 73 nt0.59□□□□□ -2.31
VBA2P38358 tT(AGU)CtT(AGU)C 73 nt0.59□□□□□ -2.31
VBA2P38358 tT(AGU)DtT(AGU)D 73 nt0.59□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms