Protein–RNA interactions for Protein: P38170

BRN1, Condensin complex subunit 2, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRN1P38170 CMC4YMR194C-B 222 nt1.41□□□□□ -2.18
BRN1P38170 YOR161W-AYOR161W-A 81 nt1.41□□□□□ -2.18
BRN1P38170 BUD3YCL014W 4911 nt1.41□□□□□ -2.18
BRN1P38170 PRP16YKR086W 3216 nt1.39□□□□□ -2.19
BRN1P38170 BEM2YER155C 6504 nt1.38□□□□□ -2.19
BRN1P38170 PRP5YBR237W 2550 nt1.38□□□□□ -2.19
BRN1P38170 GEA2YEL022W 4380 nt1.38□□□□□ -2.19
BRN1P38170 YFR012W-AYFR012W-A 87 nt1.37□□□□□ -2.19
BRN1P38170 RPL26BYGR034W 384 nt1.37□□□□□ -2.19
BRN1P38170 SCC2YDR180W 4482 nt1.36□□□□□ -2.19
BRN1P38170 YHL015W-AYHL015W-A 84 nt1.36□□□□□ -2.19
BRN1P38170 YOR102WYOR102W 351 nt1.36□□□□□ -2.19
BRN1P38170 YLR282CYLR282C 342 nt1.35□□□□□ -2.19
BRN1P38170 BFR2YDR299W 1605 nt1.34□□□□□ -2.19
BRN1P38170 SNU13YEL026W 381 nt1.34□□□□□ -2.19
BRN1P38170 tV(UAC)BtV(UAC)B 74 nt1.34□□□□□ -2.19
BRN1P38170 tV(UAC)DtV(UAC)D 74 nt1.34□□□□□ -2.19
BRN1P38170 COX5BYIL111W 456 nt1.34□□□□□ -2.19
BRN1P38170 ASE1YOR058C 2658 nt1.34□□□□□ -2.2
BRN1P38170 YDL073WYDL073W 2955 nt1.34□□□□□ -2.2
BRN1P38170 snR48snR48 113 nt1.32□□□□□ -2.2
BRN1P38170 tL(UAA)QtL(UAA)Q 85 nt1.3□□□□□ -2.2
BRN1P38170 YGL182CYGL182C 324 nt1.3□□□□□ -2.2
BRN1P38170 YKL100W-AYKL100W-A 90 nt1.3□□□□□ -2.2
BRN1P38170 SIP4YJL089W 2490 nt1.3□□□□□ -2.2
BRN1P38170 UTP8YGR128C 2142 nt1.3□□□□□ -2.2
BRN1P38170 YOR314W-AYOR314W-A 111 nt1.29□□□□□ -2.2
BRN1P38170 YML002WYML002W 2214 nt1.28□□□□□ -2.2
BRN1P38170 YBL039C-AYBL039C-A 84 nt1.28□□□□□ -2.2
BRN1P38170 snR190snR190 190 nt1.28□□□□□ -2.2
BRN1P38170 YLR041WYLR041W 321 nt1.27□□□□□ -2.21
BRN1P38170 SEC8YPR055W 3198 nt1.26□□□□□ -2.21
BRN1P38170 Q0143Q0143 153 nt1.26□□□□□ -2.21
BRN1P38170 FYV10YIL097W 1551 nt1.25□□□□□ -2.21
BRN1P38170 LTE1YAL024C 4308 nt1.25□□□□□ -2.21
BRN1P38170 TAH1YCR060W 336 nt1.24□□□□□ -2.21
BRN1P38170 SPT7YBR081C 3999 nt1.24□□□□□ -2.21
BRN1P38170 DOP1YDR141C 5097 nt1.24□□□□□ -2.21
BRN1P38170 UTP20YBL004W 7482 nt1.23□□□□□ -2.21
BRN1P38170 CHS6YJL099W 2241 nt1.23□□□□□ -2.21
BRN1P38170 EMT1tM(CAU)D 73 nt1.22□□□□□ -2.21
BRN1P38170 EMT5tM(CAU)J1 73 nt1.22□□□□□ -2.21
BRN1P38170 EMT3tM(CAU)J2 73 nt1.22□□□□□ -2.21
BRN1P38170 EMT4tM(CAU)M 73 nt1.22□□□□□ -2.21
BRN1P38170 EMT2tM(CAU)O2 73 nt1.22□□□□□ -2.21
BRN1P38170 VAM6YDL077C 3150 nt1.22□□□□□ -2.21
BRN1P38170 YLR399W-AYLR399W-A 105 nt1.21□□□□□ -2.22
BRN1P38170 YCL001W-BYCL001W-B 255 nt1.21□□□□□ -2.22
BRN1P38170 YOR329W-AYOR329W-A 210 nt1.2□□□□□ -2.22
BRN1P38170 YPR117WYPR117W 7470 nt1.2□□□□□ -2.22
BRN1P38170 YPR160W-AYPR160W-A 81 nt1.17□□□□□ -2.22
BRN1P38170 YSP1YHR155W 3687 nt1.17□□□□□ -2.22
BRN1P38170 YLR232WYLR232W 348 nt1.16□□□□□ -2.22
BRN1P38170 snR39BsnR39B 96 nt1.16□□□□□ -2.22
BRN1P38170 YDR544CYDR544C 429 nt1.15□□□□□ -2.23
BRN1P38170 tN(GUU)QtN(GUU)Q 71 nt1.14□□□□□ -2.23
BRN1P38170 QCR9YGR183C 201 nt1.13□□□□□ -2.23
BRN1P38170 YNL205CYNL205C 423 nt1.13□□□□□ -2.23
BRN1P38170 BEM3YPL115C 3387 nt1.13□□□□□ -2.23
BRN1P38170 YHR131W-AYHR131W-A 246 nt1.12□□□□□ -2.23
BRN1P38170 YIL071W-AYIL071W-A 477 nt1.12□□□□□ -2.23
BRN1P38170 YNL067W-BYNL067W-B 141 nt1.12□□□□□ -2.23
BRN1P38170 snR85snR85 171 nt1.11□□□□□ -2.23
BRN1P38170 YJR029WYJR029W 5268 nt1.11□□□□□ -2.23
BRN1P38170 YPR137C-BYPR137C-B 5268 nt1.11□□□□□ -2.23
BRN1P38170 OST4YDL232W 111 nt1.1□□□□□ -2.23
BRN1P38170 PAU24YBR301W 363 nt1.08□□□□□ -2.24
BRN1P38170 tM(CAU)Q2tM(CAU)Q2 78 nt1.07□□□□□ -2.24
BRN1P38170 YCR095W-AYCR095W-A 159 nt1.05□□□□□ -2.24
BRN1P38170 SEC1YDR164C 2175 nt1.05□□□□□ -2.24
BRN1P38170 COG6YNL041C 2520 nt1.05□□□□□ -2.24
BRN1P38170 YDR210WYDR210W 228 nt1.04□□□□□ -2.24
BRN1P38170 SOM1YEL059C-A 225 nt1.04□□□□□ -2.24
BRN1P38170 RKR1YMR247C 4689 nt1.04□□□□□ -2.24
BRN1P38170 MYO1YHR023W 5787 nt1.03□□□□□ -2.24
BRN1P38170 YBR099CYBR099C 384 nt1.03□□□□□ -2.24
BRN1P38170 PAU12YGR294W 363 nt1.02□□□□□ -2.25
BRN1P38170 IQG1YPL242C 4488 nt1.02□□□□□ -2.25
BRN1P38170 YJL127W-AYJL127W-A 117 nt0.98□□□□□ -2.25
BRN1P38170 RPM2YML091C 3609 nt0.96□□□□□ -2.26
BRN1P38170 tF(GAA)BtF(GAA)B 73 nt0.95□□□□□ -2.26
BRN1P38170 tF(GAA)FtF(GAA)F 73 nt0.95□□□□□ -2.26
BRN1P38170 tF(GAA)GtF(GAA)G 73 nt0.95□□□□□ -2.26
BRN1P38170 tF(GAA)H1tF(GAA)H1 73 nt0.95□□□□□ -2.26
BRN1P38170 tF(GAA)H2tF(GAA)H2 73 nt0.95□□□□□ -2.26
BRN1P38170 tF(GAA)MtF(GAA)M 73 nt0.95□□□□□ -2.26
BRN1P38170 tF(GAA)P1tF(GAA)P1 73 nt0.95□□□□□ -2.26
BRN1P38170 tF(GAA)P2tF(GAA)P2 73 nt0.95□□□□□ -2.26
BRN1P38170 YIL142C-AYIL142C-A 333 nt0.95□□□□□ -2.26
BRN1P38170 YBR072C-AYBR072C-A 162 nt0.95□□□□□ -2.26
BRN1P38170 PMP2YEL017C-A 132 nt0.94□□□□□ -2.26
BRN1P38170 YGR146C-AYGR146C-A 162 nt0.94□□□□□ -2.26
BRN1P38170 YPR159C-AYPR159C-A 102 nt0.94□□□□□ -2.26
BRN1P38170 BIR1YJR089W 2865 nt0.91□□□□□ -2.26
BRN1P38170 GLG1YKR058W 1851 nt0.91□□□□□ -2.26
BRN1P38170 YNL103W-AYNL103W-A 90 nt0.91□□□□□ -2.26
BRN1P38170 YMR160WYMR160W 2451 nt0.91□□□□□ -2.26
BRN1P38170 MLP1YKR095W 5628 nt0.9□□□□□ -2.26
BRN1P38170 ULP2YIL031W 3105 nt0.9□□□□□ -2.27
BRN1P38170 RCO1YMR075W 2055 nt0.9□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 22.1 ms